RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PATL1Q86TB9 770 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ANKRD13BQ86YJ7 626 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CHERPQ8IWX8 916 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CRIPAKQ8N1N5 446 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 FIBCD1Q8N539 461 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 LZTR1Q8N653 840 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CCNYL1Q8N7R7 359 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 Q8N9G6 341 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ARNTL2Q8WYA1 636 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 KCNN1Q92952 543 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ISOC1Q96CN7 298 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 HEXIM2Q96MH2 286 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CGRRF1Q99675 332 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 IDI2Q9BXS1 227 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 XYLT2Q9H1B5 865 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 R3HDMLQ9H3Y0 253 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF696Q9H7X3 374 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 NRDE2Q9H7Z3 1164 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PCDH18Q9HCL0 1135 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 FBRSL1Q9HCM7 1045 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CYP4F12Q9HCS2 524 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PXMP2Q9NR77 195 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 MAP10Q9P2G4 905 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 STK39Q9UEW8 545 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 FETUBQ9UGM5 382 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 TMEM98Q9Y2Y6 226 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PTGDR2Q9Y5Y4 395 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ST14Q9Y5Y6 855 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 COL16A1Q07092 1604 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 GREB1LQ9C091 1923 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 VCANP13611 3396 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PRORSD1PA6NEY8 169 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 FBP2O00757 339 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 TOR1BO14657 336 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ACOT8O14734 319 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CHADO15335 359 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GRID2O43424 1007 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 AP1G1O43747 822 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 VAPBO95292 243 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PIGNO95427 931 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 EGFRP00533 1210 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ICAM1P05362 532 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NR3C2P08235 984 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GARTP22102 1010 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PSMB4P28070 264 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 POLR2IP36954 125 aaKnown RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NR1H2P55055 460 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CLDN10P78369 228 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GSTM4Q03013 218 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 RELAQ04206 551 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 IKBKEQ14164 716 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 FBXO48Q5FWF7 155 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 AARS2Q5JTZ9 985 aaKnown RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PERM1Q5SV97 790 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ARHGAP17Q68EM7 881 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 KRT80Q6KB66 452 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PIWIL3Q7Z3Z3 882 aaKnown RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 FAM35AQ86V20 835 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SP8Q8IXZ3 490 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CCDC185Q8N715 623 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SLC4A11Q8NBS3 891 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 TTC16Q8NEE8 873 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 OR52K1Q8NGK4 314 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 HMGCLL1Q8TB92 370 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CHURC1Q8WUH1 139 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PDCD6IPQ8WUM4 868 aaKnown RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 LPGAT1Q92604 370 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ATG4CQ96DT6 458 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NGLY1Q96IV0 654 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 BTBD9Q96Q07 612 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NTPCRQ9BSD7 190 aaKnown RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SLC2A11Q9BYW1 496 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NIF3L1Q9GZT8 377 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 KLC2Q9H0B6 622 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CDH19Q9H159 772 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PRDM8Q9NQV8 689 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PDLIM7Q9NR12 457 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 POLE4Q9NR33 117 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CCDC167Q9P0B6 97 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 BARX2Q9UMQ3 279 aaPredicted RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 USP22Q9UPT9 525 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 AURKCQ9UQB9 309 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 DGKBQ9Y6T7 804 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SCN9AQ15858 1988 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PRSS51A0A1B0GVH4 220 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 TTC24A2A3L6 582 aaPredicted RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 FUOMA2VDF0 154 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 TCAF2A6NFQ2 919 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 C9IYK1 514 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PRPSAP2O60256 369 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SERPINB7O75635 380 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 IL1BP01584 269 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ITGB3P05106 788 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SBK3P0C264 359 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GSTT2P0CG29 244 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GSTT2BP0CG30 244 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GOT1P17174 413 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 UGT1A1P22309 533 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 UGT1A4P22310 534 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GLDCP23378 1020 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms