RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 IMPDH2P12268 514 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 TNFRSF8P28908 595 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 NR2C2P49116 596 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 ARMCX4Q5H9R4 360 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 MYLPFQ96A32 169 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 PCDH9Q9HC56 1237 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 SHOC2Q9UQ13 582 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 E9PBE3 544 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 B4GALT5O43286 388 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 KLHL41O60662 606 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 ADRB2P07550 413 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 PSEN1P49768 467 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZNF135P52742 658 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 NOL9Q5SY16 702 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 CCDC36Q8IYA8 594 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 B3GALNT2Q8NCR0 500 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 AP1S3Q96PC3 154 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 MYLK2Q9H1R3 596 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 UBA2Q9UBT2 640 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 SNX6Q9UNH7 406 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 EPB42P16452 691 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 LAG3P18627 525 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 SOAT1P35610 550 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 GRK3P35626 688 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 LGALS3BPQ08380 585 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 PPIGQ13427 754 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■□□□ 13.5
RAPGEF1-201ENST00000372189 ACAP1Q15027 740 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 CENPTQ96BT3 561 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 RMND5AQ9H871 391 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 VANGL2Q9ULK5 521 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 LINC00854A0A1B0GVQ3 168 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 INHAP05111 366 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 HDCP19113 662 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 AMPD1P23109 780 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 CASP5P51878 434 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 ABATP80404 500 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 BCL2L1Q07817 233 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 TRIP4Q15650 581 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 NT5DC3Q86UY8 548 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 TADA1Q96BN2 335 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 GAS2L1Q99501 681 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 COPS7BQ9H9Q2 264 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 SPASTQ9UBP0 616 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 NUDT5Q9UKK9 219 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 FZD9O00144 591 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 FCHO1O14526 889 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 HPCAP84074 193 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 C7orf61Q8IZ16 206 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 DENND6BQ8NEG7 585 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 BBS1Q8NFJ9 593 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 RSPH9Q9H1X1 276 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 CTNNAL1Q9UBT7 734 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 TRHDEQ9UKU6 1024 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 NALCNQ8IZF0 1738 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 RGS5O15539 181 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 NOS2P35228 1153 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 RPL21P46778 160 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 HDAC7Q8WUI4 952 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 PPP1R16AQ96I34 528 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 C1QTNF7Q9BXJ2 289 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLC28A3Q9HAS3 691 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 CBY1Q9Y3M2 126 aa13.51□□□□□ -0.25
RAPGEF1-201ENST00000372189 NCF1BA6NI72 391 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PDZK1P1A8MUH7 402 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 NCF1CA8MVU1 366 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 TRIM24O15164 1050 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZW10O43264 779 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 GNRH1P01148 92 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 NCF1P14598 390 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLC20A2Q08357 652 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 RD3Q7Z3Z2 195 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 HSD17B14Q9BPX1 270 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 BAIAP2Q9UQB8 552 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 MAGEB16A2A368 324 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 APOL3O95236 402 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 MPOP05164 745 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 ERVK-10P10266 1014 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 ALOX15P16050 662 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PPP3CAQ08209 521 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZFP1Q6P2D0 407 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 IKBIPQ70UQ0 350 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 RBM23Q86U06 439 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 IFNL1Q8IU54 200 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 RMND5BQ96G75 393 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 MSANTD3Q96H12 275 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 APOPT1Q96IL0 206 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZCCHC2Q9C0B9 1178 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PNO1Q9NRX1 252 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 GGA2Q9UJY4 613 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 BTN3A3O00478 584 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 POLR2LP62875 67 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRKCZQ05513 592 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 KIAA0408Q6ZU52 694 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms