RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 SMYD3Q9H7B4 428 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 MTMR10Q9NXD2 777 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 MTCH2Q9Y6C9 303 aa11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 TDRD15B5MCY1 1934 aaKnown RBP11.7□□□□□ -0.54
TSPAN1-201ENST00000372003 ARHGEF37A1IGU5 675 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 FAM159BA6NKW6 160 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 HCRTO43612 131 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 STAU1O95793 577 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 TRUB2O95900 331 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 CNPP09543 421 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 PDGFRBP09619 1106 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 P4HA1P13674 534 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 VCLP18206 1134 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 TYMPP19971 482 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 GRK2P25098 689 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 GABRB2P47870 512 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 CHN2P52757 468 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 COPAP53621 1224 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 KDSRQ06136 332 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 NAB1Q13506 487 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 TUBB3Q13509 450 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 TBC1D25Q3MII6 688 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 HSP90AA5PQ58FG0 334 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 CFAP157Q5JU67 520 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 PDE12Q6L8Q7 609 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 DARS2Q6PI48 645 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 RSPO2Q6UXX9 243 aaPredicted RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 MARVELD2Q8N4S9 558 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 TOP6BLQ8N6T0 577 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 ARFGAP1Q8N6T3 406 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 PPM1NQ8N819 430 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 CATSPER1Q8NEC5 780 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 PPP1R14BQ96C90 147 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 FAF2Q96CS3 445 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 CMTM5Q96DZ9 223 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 EMILIN2Q9BXX0 1053 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 SDCBP2Q9H190 292 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 POPDC2Q9HBU9 364 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 XAB2Q9HCS7 855 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 ASNSD1Q9NWL6 643 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 ZC3H7BQ9UGR2 993 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 DSEQ9UL01 958 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 APOBEC2Q9Y235 224 aaKnown RBP11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 MAD1L1Q9Y6D9 718 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 TRIP11Q15643 1979 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
TSPAN1-201ENST00000372003 ANK1P16157 1881 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 BCLAF3A2AJT9 711 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 ZNF487B1APH4 448 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 H7C4K7 107 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 TEX28O15482 410 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 ADAM12O43184 909 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 LILRB3O75022 631 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 CYP11A1P05108 521 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 OR4Q2P0C623 313 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 CCDC130P13994 396 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 FOSL2P15408 326 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 VAV1P15498 845 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 TGM2P21980 687 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 LMO2P25791 158 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 IL1R2P27930 398 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 OR1D2P34982 312 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 RFC1P35251 1148 aaPredicted RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 NRIP1P48552 1158 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 ALDH18A1P54886 795 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 DYNLT1P63172 113 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 MRPL58Q14197 206 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 CCDC85BQ15834 202 aaPredicted RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 INSCQ1MX18 579 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 TCEAL5Q5H9L2 206 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 ZNF280DQ6N043 979 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 RAPH1Q70E73 1250 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 DPH6Q7L8W6 267 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 OSTM1Q86WC4 334 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 CTAGE3PQ8IX95 158 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 THEM5Q8N1Q8 247 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 FBXO27Q8NI29 283 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 GSDMBQ8TAX9 411 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 KBTBD7Q8WVZ9 684 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 HIC2Q96JB3 615 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 KLHL5Q96PQ7 755 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 KCNK16Q96T55 309 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 DDX50Q9BQ39 737 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 CLSTN3Q9BQT9 956 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 KLC2Q9H0B6 622 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 SNX25Q9H3E2 840 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 CISHQ9NSE2 258 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 BCAP29Q9UHQ4 241 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 CDY1Q9Y6F8 540 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 OPHN1O60890 802 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 GLRA3O75311 464 aa11.68□□□□□ -0.54
TSPAN1-201ENST00000372003 TMCC1O94876 653 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms