RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 LEFTY2O00292 366 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 GFRA2O00451 464 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 PRAMEF11O60813 436 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 MOSPD3O75425 235 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 RHOCP08134 193 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 ZNF697Q5TEC3 545 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 OTOP3Q7RTS5 596 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 KLHDC8BQ8IXV7 354 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 CPXM2Q8N436 756 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 TEX26Q8N6G2 289 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 TTC16Q8NEE8 873 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 EPS8L3Q8TE67 593 aaKnown RBP26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 ZNF599Q96NL3 588 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 MLPHQ9BV36 600 aaPredicted RBP26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 STMN4Q9H169 189 aaPredicted RBP26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 PPCSQ9HAB8 311 aa26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 BCCIPQ9P287 314 aaKnown RBP eCLIP26.81■■□□□ 1.88
ATPAF1-202ENST00000371937 SDR42E2A6NKP2 422 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 AP3B1O00203 1094 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 CPP00450 1065 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 HLA-DQB2P05538 268 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 SSTR1P30872 391 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 TNK2Q07912 1038 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 DUSP6Q16828 381 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 LONRF1Q17RB8 773 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 KCTD16Q68DU8 428 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 ZNF783Q6ZMS7 281 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 CAPN12Q6ZSI9 719 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 GRASPQ7Z6J2 395 aaPredicted RBP26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 IGDCC3Q8IVU1 814 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 ZNF419Q96HQ0 510 aaPredicted RBP26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 SIGLEC10Q96LC7 697 aa26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 ZC3H7BQ9UGR2 993 aaKnown RBP26.8■■□□□ 1.88
ATPAF1-202ENST00000371937 SMIM23A6NLE4 172 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 RGS16O15492 202 aaPredicted RBP26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 TBL1XO60907 577 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 SLC5A9Q2M3M2 681 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 PRSS36Q5K4E3 855 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 IL31Q6EBC2 164 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 LINC00523Q86TU6 105 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 AGGF1Q8N302 714 aaeCLIP26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 ZNF707Q96C28 371 aaPredicted RBP26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 EBNA1BP2Q99848 306 aaKnown RBP26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 HAUS2Q9NVX0 235 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 A0A0D9SEW6 157 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 EXOC1LA0A1B0GW35 172 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 E2F8A0AVK6 867 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 SCAMP3O14828 347 aaKnown RBP26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 GSTA2P09210 222 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 MMP13P45452 471 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 NRIP1P48552 1158 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 GEMP55040 296 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 SLC10A7Q0GE19 358 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 SPARCL1Q14515 664 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 TMCO4Q5TGY1 634 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 NAPEPLDQ6IQ20 393 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 GDPD5Q8WTR4 605 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 OXNAD1Q96HP4 312 aaPredicted RBP26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 PIDD1Q9HB75 910 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 MAD1L1Q9Y6D9 718 aa26.79■■□□□ 1.88
ATPAF1-202ENST00000371937 H0Y626 953 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 SLCO1A2P46721 670 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 CCNJLQ8IV13 435 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 BBS7Q8IWZ6 715 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 TDRD5Q8NAT2 981 aaKnown RBP26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 OR7D4Q8NG98 312 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 FAM76AQ8TAV0 307 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 SH3RF2Q8TEC5 729 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 CDCA3Q99618 268 aaPredicted RBP26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 NAT9Q9BTE0 207 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 SLC25A51Q9H1U9 297 aa26.78■■□□□ 1.88
ATPAF1-202ENST00000371937 KDELR3O43731 214 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 CDH16O75309 829 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 OXCT1P55809 520 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 LBRQ14739 615 aaKnown RBP26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 MPP7Q5T2T1 576 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 OR52K2Q8NGK3 314 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 SPON2Q9BUD6 331 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 PDFQ9HBH1 243 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 NT5MQ9NPB1 228 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 CASS4Q9NQ75 786 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 TDP1Q9NUW8 608 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 FETUBQ9UGM5 382 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 RABGEF1Q9UJ41 708 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 CHD5Q8TDI0 1954 aa26.77■■□□□ 1.88
ATPAF1-202ENST00000371937 LUC7L3O95232 432 aaKnown RBP26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 HOXD9P28356 352 aaPredicted RBP26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 SESN2P58004 480 aaPredicted RBP26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 NTHL1P78549 312 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 KLHL38Q2WGJ6 581 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 MPPE1Q53F39 396 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 CXorf57Q6NSI4 855 aaKnown RBP26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 BBS5Q8N3I7 341 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 RIBC1Q8N443 379 aaPredicted RBP26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 CARNMT1Q8N4J0 409 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 DNAAF3Q8N9W5 541 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 SMG7Q92540 1137 aaKnown RBP26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 PPP2R3CQ969Q6 453 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 STAMBPL1Q96FJ0 436 aa26.76■■□□□ 1.88
ATPAF1-202ENST00000371937 CFAP36Q96G28 342 aa26.76■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms