RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 HALP42357 657 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 TTLL4Q14679 1199 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 MFSD7Q6UXD7 560 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 CD302Q8IX05 232 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 PIH1D2Q8WWB5 315 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 DMRTB1Q96MA1 342 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 EDARQ9UNE0 448 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 ZNF232Q9UNY5 417 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 CYP7B1O75881 506 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 CYP24A1Q07973 514 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 TTI2Q6NXR4 508 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 NEK6Q9HC98 313 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 M0QX08 132 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 TULP2O00295 520 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 MID1O15344 667 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 UMPSP11172 480 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 C12orf66Q96MD2 445 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 IGSF9BQ9UPX0 1349 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 CD4P01730 458 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 SPESP1Q6UW49 350 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 ZCCHC23Q6ZST2 131 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 SMIM5Q71RC9 77 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 RNF149Q8NC42 400 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 HM13Q8TCT9 377 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 KAT2BQ92831 832 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 TPK1Q9H3S4 243 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 NMRAL1Q9HBL8 299 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 FADS2O95864 444 aaKnown RBP15.47■□□□□ 0.07
COL5A1-201ENST00000371817 HLA-DRAP01903 254 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 S100A3P33764 101 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 ADGRE3Q9BY15 652 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 NCAM2O15394 837 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 ZNF234Q14588 700 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 MAFFQ9ULX9 164 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 AP5Z1O43299 807 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 PRKCBP05771 671 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 NR2C2P49116 596 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 PCDH20Q8N6Y1 951 aaKnown RBP15.47■□□□□ 0.07
COL5A1-201ENST00000371817 CST11Q9H112 138 aa15.47■□□□□ 0.07
COL5A1-201ENST00000371817 DGAT1O75907 488 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 CD151P48509 253 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 SMIM11AP58511 58 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 NAB1Q13506 487 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 ZMYND11Q15326 602 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 CNSTQ6PJW8 725 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 NXNL1Q96CM4 212 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 CPDO75976 1380 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 A0A087X1B8 175 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 H3BM21 787 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 KCNQ3O43525 872 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 SLC2A3P11169 496 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 MTAPQ13126 283 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 UBAP2LQ14157 1087 aaKnown RBP15.46■□□□□ 0.07
COL5A1-201ENST00000371817 MYBPC3Q14896 1274 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 CNPY1Q3B7I2 92 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 LDLRAP1Q5SW96 308 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 TRIM48Q8IWZ4 208 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 METTL6Q8TCB7 284 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 NIF3L1Q9GZT8 377 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 ACTL7BQ9Y614 415 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 LYNP07948 512 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 MYL3P08590 195 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 ELK3P41970 407 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 PPM1LQ5SGD2 360 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 SEPT12Q8IYM1 358 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 EMILIN2Q9BXX0 1053 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 UNKQ9C0B0 810 aaKnown RBP15.46■□□□□ 0.07
COL5A1-201ENST00000371817 XPR1Q9UBH6 696 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 A0A096LPK6 155 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 TRIM38O00635 465 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 MNDAP41218 407 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 PDK4Q16654 411 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 TRNT1Q96Q11 434 aaKnown RBP15.46■□□□□ 0.07
COL5A1-201ENST00000371817 PPEF1O14829 653 aaPredicted RBP15.46■□□□□ 0.07
COL5A1-201ENST00000371817 REM1O75628 298 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 NCK1P16333 377 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 FIGNQ5HY92 759 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 MAGEE1Q9HCI5 957 aa15.46■□□□□ 0.07
COL5A1-201ENST00000371817 SAMHD1Q9Y3Z3 626 aaKnown RBP15.46■□□□□ 0.07
COL5A1-201ENST00000371817 PTPRKQ15262 1439 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 RGS10O43665 173 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 TBC1D21Q8IYX1 336 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 PTPRHQ9HD43 1115 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 UPB1Q9UBR1 384 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 MAPK12P53778 367 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 RPL6Q02878 288 aaKnown RBP15.46■□□□□ 0.06
COL5A1-201ENST00000371817 CA9Q16790 459 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.46■□□□□ 0.06
COL5A1-201ENST00000371817 LRRC69Q6ZNQ3 347 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 SATL1Q86VE3 508 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 FOXP4Q8IVH2 680 aaPredicted RBP15.46■□□□□ 0.06
COL5A1-201ENST00000371817 PI4K2AQ9BTU6 479 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 PRKAG2Q9UGJ0 569 aa15.46■□□□□ 0.06
COL5A1-201ENST00000371817 ZSCAN5CA6NGD5 496 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 KPNA3O00505 521 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 MAP3K6O95382 1288 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 ATP5F1P24539 256 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 SSTR1P30872 391 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 ST3GAL1Q11201 340 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 SLFN11Q7Z7L1 901 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms