RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CRYL1Q9Y2S2 319 aa12.02□□□□□ -0.48
DEPDC1-201ENST00000370966 SHOX2O60902 331 aaPredicted RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 SERPINA6P08185 405 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 CCDC166P0CW27 439 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 DARSP14868 501 aaKnown RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 ADRA1BP35368 520 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 KCNJ2P63252 427 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 LLGL2Q6P1M3 1020 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 GPSM1Q86YR5 675 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 MRPL57Q9BQC6 102 aaKnown RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 WDR41Q9HAD4 459 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 RNF19AQ9NV58 838 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 CCDC154A6NI56 674 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 SNTNA6NMZ2 147 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 EFCAB14O75071 495 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 BANF1O75531 89 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 WDR47O94967 919 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 OR56A5P0C7T3 313 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 FGFR1P11362 822 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 VCLP18206 1134 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 MAPK8P45983 427 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 CCT8P50990 548 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 POLR2LP62875 67 aaKnown RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 DRICH1Q6PGQ1 229 aaPredicted RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 PACS1Q6VY07 963 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 RNF148Q8N7C7 305 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 ZFRQ96KR1 1074 aaKnown RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 RNPEPQ9H4A4 650 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 SIX2Q9NPC8 291 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 PNMA8BQ9ULN7 279 aaPredicted RBP12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 TMCO1Q9UM00 188 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 ST3GAL5Q9UNP4 418 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
DEPDC1-201ENST00000370966 RGSL1A5PLK6 1076 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 RNASEH1O60930 286 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 MSH3P20585 1137 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 NUMBP49757 651 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 RAB10P61026 200 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TJAP1Q5JTD0 557 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TREML2Q5T2D2 321 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 OLFML2BQ68BL8 750 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 CCDC81Q6ZN84 652 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 MYLPFQ96A32 169 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TADA1Q96BN2 335 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 HGH1Q9BTY7 390 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 PDGFDQ9GZP0 370 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 LRMDAQ9H2I8 198 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 A0A1W2PPM1 405 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 RRM2P31350 389 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 GPC1P35052 558 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 ABCG1P45844 678 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 VAC14Q08AM6 782 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 PGS1Q32NB8 556 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 PREPLQ4J6C6 727 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 DCLRE1AQ6PJP8 1040 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 PGBD3Q8N328 593 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 C1orf127Q8N9H9 656 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 RMND5BQ96G75 393 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 C9orf16Q9BUW7 83 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 UGT2B28Q9BY64 529 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 ZCWPW1Q9H0M4 648 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 CYLDQ9NQC7 956 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 XPNPEP1Q9NQW7 623 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM105AQ9NUU6 356 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 AHSPQ9NZD4 102 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TCRBV7S2A1N4TA0A589 114 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 BCLAF3A2AJT9 711 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 CLOCKO15516 846 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TSPAN3O60637 253 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 ZNF682O95780 498 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 GRK3P35626 688 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 GRIK3Q13003 919 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 BTG3Q14201 252 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 CCDC85BQ15834 202 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 INSCQ1MX18 579 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 DDHD1Q8NEL9 900 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 C12orf42Q96LP6 360 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 CSPG4P5Q96PW8 444 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 CAMKK2Q96RR4 588 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 MRPL45Q9BRJ2 306 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 FTHL17Q9BXU8 183 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM208AQ9UK61 1670 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 SLIT2O94813 1529 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 MDM4O15151 490 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 GUCA1CO95843 209 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 FMO4P31512 558 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 CD86P42081 329 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 NEK3P51956 506 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TRAF2Q12933 501 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 HECTD3Q5T447 861 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 STXBP5Q5T5C0 1151 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 TTC27Q6P3X3 843 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 PLD5Q8N7P1 536 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms