RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 GRIN2DO15399 1336 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 MGEA5O60502 916 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 GLP2RO95838 553 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 PTPN3P26045 913 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 IVDP26440 423 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 LRPAP1P30533 357 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 GABRB2P47870 512 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 NME5P56597 212 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 GPX6P59796 221 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 SLC10A2Q12908 348 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 UPP1Q16831 310 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 SPANXN3Q5MJ09 141 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 ZNF697Q5TEC3 545 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 LINGO4Q6UY18 593 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 PACS1Q6VY07 963 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 OTOAQ7RTW8 1153 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 SLC41A1Q8IVJ1 513 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 SPPL2BQ8TCT7 592 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 ZNF296Q8WUU4 475 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 NSL1Q96IY1 281 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 PPP1R10Q96QC0 940 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 NPY6RQ99463 290 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 CORO1BQ9BR76 489 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 MYLK2Q9H1R3 596 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 ADAM7Q9H2U9 754 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 MAN1C1Q9NR34 630 aa7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 MRPL17Q9NRX2 175 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-202ENST00000370399 MAGEB16A2A368 324 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 C5orf60A6NFR6 353 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 FGF10O15520 208 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 LYPLA1O75608 230 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 DDHD2O94830 711 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 EOMESO95936 686 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 CSH1P0DML2 217 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 CSH2P0DML3 217 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SLC1A6P48664 564 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SERPINH1P50454 418 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 WDR4P57081 412 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 DLG2Q15700 870 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 DBN1Q16643 649 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 PDK4Q16654 411 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 IFNEQ86WN2 208 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 MAB21L3Q8N8X9 362 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 OR7D4Q8NG98 312 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 PSMG2Q969U7 264 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 CENPTQ96BT3 561 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 TSPAN17Q96FV3 270 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 TSPAN18Q96SJ8 248 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 AGAP2Q99490 1192 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 FAM167BQ9BTA0 163 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 UBE2OQ9C0C9 1292 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SLC39A8Q9C0K1 460 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 POLR1EQ9GZS1 481 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 BRD8Q9H0E9 1235 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 NMRAL1Q9HBL8 299 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 RXFP1Q9HBX9 757 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 TMEM161AQ9NX61 479 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 UBA2Q9UBT2 640 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 FCHO1O14526 889 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SHOX2O60902 331 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 TOP3BO95985 862 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 PFKMP08237 780 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 MAP2K2P36507 400 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 PLIN5Q00G26 463 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 DSC2Q02487 901 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 HIC1Q14526 733 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 ANKRD20A4Q4UJ75 823 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SGO1Q5FBB7 561 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 BRMS1LQ5PSV4 323 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 LRRTM3Q86VH5 581 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 HS6ST3Q8IZP7 471 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 FBXO22Q8NEZ5 403 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 HDAC10Q969S8 669 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SERAC1Q96JX3 654 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SUSD3Q96L08 255 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 CPNE1Q99829 537 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 IL1RL2Q9HB29 575 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 GLOD4Q9HC38 313 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 TMLHEQ9NVH6 421 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 NSMCE4AQ9NXX6 385 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 NOP53Q9NZM5 478 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 CHKBQ9Y259 395 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 OR6C75A6NL08 312 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 KCNU1A8MYU2 1149 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 IRAK2O43187 625 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 GCATO75600 419 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 TRIM16O95361 564 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 NQO1P15559 274 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 RPS24P62847 133 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 POM121L1PQ3SYA9 428 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 PCID2Q5JVF3 399 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 PPP1R15BQ5SWA1 713 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 GRTP1Q5TC63 336 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 AGAP9Q5VTM2 703 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 TRNP1Q6NT89 227 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 RGS9BPQ6ZS82 235 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 RBM23Q86U06 439 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 KCTD4Q8WVF5 259 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 SEC14L1Q92503 715 aa7.24□□□□□ -1.25
TGFBR3-202ENST00000370399 CYP2S1Q96SQ9 504 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms