RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 USP13Q92995 863 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 BORCS5Q969J3 196 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 COX4I2Q96KJ9 171 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 HIPK3Q9H422 1215 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 CAAP1Q9H8G2 361 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 TBC1D23Q9NUY8 699 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 TUBGCP4Q9UGJ1 667 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 A0A096LPK6 155 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 TCAF2A6NFQ2 919 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 TRIM64A6NGJ6 449 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-203ENST00000368690 C9IYK1 514 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 TFEBP19484 476 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 MPSTP25325 297 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 TTKP33981 857 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 HADHAP40939 763 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 STT3AP46977 705 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 CRADDP78560 199 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 STXBP2Q15833 593 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 LIPMQ5VYY2 423 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 MPZL3Q6UWV2 235 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 OLFML1Q6UWY5 402 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 ZYG11AQ6WRX3 759 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 CMC1Q7Z7K0 106 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 FIBCD1Q8N539 461 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 TTC39CQ8N584 583 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 GPRC5AQ8NFJ5 357 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 DNERQ8NFT8 737 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 ZNF420Q8TAQ5 688 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-203ENST00000368690 ISOC1Q96CN7 298 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 ZNF512Q96ME7 567 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-203ENST00000368690 PHF12Q96QT6 1004 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 NRBP2Q9NSY0 501 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 HMGXB4Q9UGU5 601 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 SARDHQ9UL12 918 aa17.71■□□□□ 0.43
CHTOP-203ENST00000368690 MAFO75444 373 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 SUPT3HO75486 399 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PRKCBP05771 671 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 DNAJB1P25685 340 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 SLC7A1P30825 629 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 SESN2P58004 480 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PFKPQ01813 784 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 FSTL1Q12841 308 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 C16orf72Q14CZ0 275 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 NRF1Q16656 503 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ZNF829Q3KNS6 432 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 C1QTNF12Q5T7M4 302 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 COLGALT1Q8NBJ5 622 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 UBA3Q8TBC4 463 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ATP6V1E2Q96A05 226 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PGBD4Q96DM1 585 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PIWIL1Q96J94 861 aaKnown RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 HEXIM2Q96MH2 286 aaKnown RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 EFHD1Q9BUP0 239 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 LIN28AQ9H9Z2 209 aaKnown RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 SYBUQ9NX95 663 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 HESX1Q9UBX0 185 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ANKRD6Q9Y2G4 727 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 MGAMO43451 1857 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 TCRBV3S1A0A5B6 114 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PIK3R2O00459 728 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 XPO1O14980 1071 aaKnown RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 CABYRO75952 493 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ERVK-10P10266 1014 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ICAM3P32942 547 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 MSX2P35548 267 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 MAGEA10P43363 369 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ORC1Q13415 861 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PPP6R3Q5H9R7 873 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 FSTL4Q6MZW2 842 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 EEPD1Q7L9B9 569 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ANKRD23Q86SG2 305 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ZBTB8OSQ8IWT0 167 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 PACRGLQ8N7B6 248 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 ANKFN1Q8N957 763 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 TNIP2Q8NFZ5 429 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 GIPC3Q8TF64 312 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 DOK1Q99704 481 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 UNC93B1Q9H1C4 597 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 DTLQ9NZJ0 730 aa17.7■□□□□ 0.42
CHTOP-203ENST00000368690 BARX2Q9UMQ3 279 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-203ENST00000368690 TRPM7Q96QT4 1865 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 TANC1Q9C0D5 1861 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 HTRA2O43464 458 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 KRT19P08727 400 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 MCF2P10911 925 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 PTPN9P43378 593 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 CSE1LP55060 971 aaKnown RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 INCA1Q0VD86 236 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 IER5Q5VY09 327 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 PPP4R4Q6NUP7 873 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 NCCRP1Q6ZVX7 275 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 LRRN4Q8WUT4 740 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 PTPN18Q99952 460 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 DNAI2Q9GZS0 605 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 C2orf40Q9H1Z8 148 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 MROH8Q9H579 483 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms