RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZNF567Q8N184 647 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 OR7D4Q8NG98 312 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 OR52K2Q8NGK3 314 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 ART4Q93070 314 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 IL12RB2Q99665 862 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 GRHL1Q9NZI5 618 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 IGSF9Q9P2J2 1179 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 C5orf42Q9H799 3197 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 J3KR12 359 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 CBX4O00257 560 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 CHADO15335 359 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 MBTPS2O43462 519 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PEX11BO96011 259 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 CSKP41240 450 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 BASP1P80723 227 aaKnown RBP12.56□□□□□ -0.4
TUBE1-202ENST00000368662 TNK2Q07912 1038 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 ZBTB17Q13105 803 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 DMC1Q14565 340 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 IZUMO3Q5VZ72 239 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 TRIM68Q6AZZ1 485 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PARM1Q6UWI2 310 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 METTL3Q86U44 580 aaKnown RBP12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PPIL6Q8IXY8 311 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 CPA6Q8N4T0 437 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 FGF14Q92915 247 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 PDFQ9HBH1 243 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 RAB6BQ9NRW1 208 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 MTRF1LQ9UGC7 380 aaKnown RBP12.56□□□□□ -0.4
TUBE1-202ENST00000368662 ANAPC5Q9UJX4 755 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 NFU1Q9UMS0 254 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 OR51B4Q9Y5P0 310 aa12.56□□□□□ -0.4
TUBE1-202ENST00000368662 GOLGA6CA6NDK9 693 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 GOLGA6BA6NDN3 693 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 CACNG3O60359 315 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 GOLGA6DP0CG33 693 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ITGA8P53708 1063 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 NRLP54845 237 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 PLTPP55058 493 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 LMAN2Q12907 356 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 LBRQ14739 615 aaKnown RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 TRADDQ15628 312 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 PLEKHG6Q3KR16 790 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 RETSATQ6NUM9 610 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 TEX26Q8N6G2 289 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 WFDC5Q8TCV5 224 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 EXOC4Q96A65 974 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ALG14Q96F25 216 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ASIC4Q96FT7 647 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 TRMT61BQ9BVS5 477 aaKnown RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 FOXP3Q9BZS1 431 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 EBF3Q9H4W6 596 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 RBM22Q9NW64 420 aaKnown RBP eCLIP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 GOLGA6AQ9NYA3 693 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 UBA2Q9UBT2 640 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 NYNRINQ9P2P1 1898 aaKnown RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 E7EVH7 732 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ANHXE9PGG2 379 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 MZF1P28698 734 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 HLA-FP30511 346 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 MMP13P45452 471 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 SULT2A1Q06520 285 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 SEMA5AQ13591 1074 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 PRPSAP1Q14558 356 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ZNF235Q14590 738 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 INO80DQ53TQ3 878 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 RNASEH2BQ5TBB1 312 aaKnown RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 HIBCHQ6NVY1 386 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 EMBQ6PCB8 327 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 CEP128Q6ZU80 1094 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 FBXO25Q8TCJ0 367 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 HNRNPLLQ8WVV9 542 aaKnown RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 NXPE3Q969Y0 559 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 AGAP3Q96P47 875 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 FMO2Q99518 471 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 KXD1Q9BQD3 176 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 PHF7Q9BWX1 381 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 CEP41Q9BYV8 373 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 GBA3Q9H227 469 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ETNK1Q9HBU6 452 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ZDHHC18Q9NUE0 388 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ABCB8Q9NUT2 735 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 RSPH14Q9UHP6 348 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 GGA2Q9UJY4 613 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 CLEC4EQ9ULY5 219 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 FAM50BQ9Y247 325 aa12.55□□□□□ -0.4
TUBE1-202ENST00000368662 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-202ENST00000368662 ERI2A8K979 691 aaKnown RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 ZBTB24O43167 697 aaPredicted RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 ECHS1P30084 290 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 CD70P32970 193 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 HSPA9P38646 679 aaKnown RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 MAGEA6P43360 314 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 CDK16Q00536 496 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms