RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IGDCC3Q8IVU1 814 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 NAT8LQ8N9F0 302 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 NT5C3BQ969T7 300 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 SLC7A6OSQ96CW6 309 aaPredicted RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 FAM111AQ96PZ2 611 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 NACA2Q9H009 215 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 CYLDQ9NQC7 956 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 SMPD4Q9NXE4 827 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 USP3Q9Y6I4 520 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 H3BRJ5 948 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 SYN3O14994 580 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 ZWINTO95229 277 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 T-ENOLP0DO92 83 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 YWHAQP27348 245 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 PM20D1Q6GTS8 502 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 LRRC6Q86X45 466 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 VPS52Q8N1B4 723 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 TOP1MTQ969P6 601 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 NMD3Q96D46 503 aaKnown RBP10.87□□□□□ -0.67
TPM3-212ENST00000368533 FCRL2Q96LA5 508 aaPredicted RBP10.87□□□□□ -0.67
TPM3-212ENST00000368533 ZNF512Q96ME7 567 aaPredicted RBP10.87□□□□□ -0.67
TPM3-212ENST00000368533 TUBGCP5Q96RT8 1024 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
TPM3-212ENST00000368533 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 IL1RAPL1Q9NZN1 696 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 WASF2Q9Y6W5 498 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 CFAP69A5D8W1 941 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 MAGEB3O15480 346 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 C7orf61Q8IZ16 206 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 TOX2Q96NM4 488 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 SLC13A1Q9BZW2 595 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 MANSC1Q9H8J5 431 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 LRCH1Q9Y2L9 728 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 PTPRDP23468 1912 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.87□□□□□ -0.67
TPM3-212ENST00000368533 SLC12A8A0AV02 714 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 ARHGEF37A1IGU5 675 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 LCHNA4D1U4 455 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 TMEM189-UBE2V1I3L0A0 370 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 TYROBPO43914 113 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 TBX10O75333 385 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 FAM155BO75949 473 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 WFS1O76024 890 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 TIMP1P01033 207 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 KCNQ1P51787 676 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 PLD1Q13393 1074 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 KPNB1Q14974 876 aaKnown RBP10.87□□□□□ -0.67
TPM3-212ENST00000368533 TAF12Q16514 161 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 USP41Q3LFD5 358 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 ARL13BQ3SXY8 428 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 C16orf59Q7L2K0 433 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 CFAP52Q8N1V2 620 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 ST13P5Q8NFI4 369 aaPredicted RBP10.87□□□□□ -0.67
TPM3-212ENST00000368533 P2RY11Q96G91 374 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 ZNF510Q9Y2H8 683 aa10.87□□□□□ -0.67
TPM3-212ENST00000368533 TTC24A2A3L6 582 aaPredicted RBP10.86□□□□□ -0.67
TPM3-212ENST00000368533 IRAK2O43187 625 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 HOXA2O43364 376 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 SUPT3HO75486 399 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 OR6B1O95007 311 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 GJB5O95377 273 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 GJA1P17302 382 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 VHLP40337 213 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 TFB1MQ8WVM0 346 aaKnown RBP10.86□□□□□ -0.67
TPM3-212ENST00000368533 PTPRN2Q92932 1015 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 MYEOVQ96EZ4 313 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 TRAPPC9Q96Q05 1148 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 PHF12Q96QT6 1004 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 WDR83Q9BRX9 315 aaKnown RBP10.86□□□□□ -0.67
TPM3-212ENST00000368533 LRMDAQ9H2I8 198 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 GKN1Q9NS71 199 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 ABCC13Q9NSE7 274 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 NUMBLQ9Y6R0 609 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 TCRBV9S1A1TA0A576 114 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 RNF103O00237 685 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 PRRG1O14668 218 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 MYOGP15173 224 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 TGM2P21980 687 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 STIP1P31948 543 aaKnown RBP10.86□□□□□ -0.67
TPM3-212ENST00000368533 RASSF2P50749 326 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 GPR17Q13304 367 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 MRPL58Q14197 206 aaKnown RBP10.86□□□□□ -0.67
TPM3-212ENST00000368533 RAP1GAP2Q684P5 730 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 ADGRD1Q6QNK2 874 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 CES3Q6UWW8 571 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 ANKS3Q6ZW76 656 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 PID1Q7Z2X4 250 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
TPM3-212ENST00000368533 RFWD2Q8NHY2 731 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 HIC2Q96JB3 615 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 CYP2S1Q96SQ9 504 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 MIPEPQ99797 713 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 TSSK1BQ9BXA7 367 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 SPATA16Q9BXB7 569 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 TRIM55Q9BYV6 548 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 PPCSQ9HAB8 311 aa10.86□□□□□ -0.67
TPM3-212ENST00000368533 EFR3BQ9Y2G0 817 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms