RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 KLC2Q9H0B6 622 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 USP29Q9HBJ7 922 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 ABI2Q9NYB9 513 aaPredicted RBP27.06■■□□□ 1.92
EFNA1-202ENST00000368407 ZC3H7BQ9UGR2 993 aaKnown RBP27.06■■□□□ 1.92
EFNA1-202ENST00000368407 BCLAF3A2AJT9 711 aaKnown RBP27.06■■□□□ 1.92
EFNA1-202ENST00000368407 SDR42E2A6NKP2 422 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 VNN2O95498 520 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 MAGEA3P43357 314 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 PDK2Q15119 407 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 CHI3L2Q15782 390 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 PDCD2Q16342 344 aaPredicted RBP27.06■■□□□ 1.92
EFNA1-202ENST00000368407 SPATA2LQ8IUW3 424 aaPredicted RBP27.06■■□□□ 1.92
EFNA1-202ENST00000368407 PPM1NQ8N819 430 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 ACMSDQ8TDX5 336 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 MIS12Q9H081 205 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 PIDD1Q9HB75 910 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 ENTPD7Q9NQZ7 604 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 TLR9Q9NR96 1032 aa27.06■■□□□ 1.92
EFNA1-202ENST00000368407 SEC23IPQ9Y6Y8 1000 aaKnown RBP27.06■■□□□ 1.92
EFNA1-202ENST00000368407 FAM159BA6NKW6 160 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 AP1G2O75843 785 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 KLHL2O95198 593 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 CXCL14O95715 111 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 FAM200BP0CF97 657 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 CYP2F1P24903 491 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 CLCN2P51788 898 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 ZNF143P52747 638 aaPredicted RBP27.05■■□□□ 1.92
EFNA1-202ENST00000368407 BCAT1P54687 386 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 GPM6BQ13491 265 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 PLPP4Q5VZY2 271 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 IZUMO2Q6UXV1 221 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 CLEC20AQ6ZU45 233 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 PRPF39Q86UA1 669 aaKnown RBP27.05■■□□□ 1.92
EFNA1-202ENST00000368407 TTC9BQ8N6N2 239 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 PHC3Q8NDX5 983 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 TIFAQ96CG3 184 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 DUSP16Q9BY84 665 aa27.05■■□□□ 1.92
EFNA1-202ENST00000368407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.04■■□□□ 1.92
EFNA1-202ENST00000368407 MTMR11A4FU01 709 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 H3BNC9 293 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 TEX28O15482 410 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 CCNT2O60583 730 aaKnown RBP27.04■■□□□ 1.92
EFNA1-202ENST00000368407 PIAS1O75925 651 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 NPR3P17342 541 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 IRS1P35568 1242 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 UBE3AQ05086 875 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 BST2Q10589 180 aaKnown RBP27.04■■□□□ 1.92
EFNA1-202ENST00000368407 NFE2Q16621 373 aaPredicted RBP27.04■■□□□ 1.92
EFNA1-202ENST00000368407 PIP4K2CQ8TBX8 421 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 SLC35F5Q8WV83 523 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 KCNK16Q96T55 309 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 SMOQ99835 787 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 CRISPLD1Q9H336 500 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 TJP2Q9UDY2 1190 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 EPOPA6NHQ4 379 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 HIDE1A8MVS5 230 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 BUD23O43709 281 aaKnown RBP27.04■■□□□ 1.92
EFNA1-202ENST00000368407 CNPP09543 421 aaKnown RBP27.04■■□□□ 1.92
EFNA1-202ENST00000368407 CPOXP36551 454 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 RGS7P49802 495 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 MAP3K7CLP57077 242 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 SMAD3P84022 425 aaKnown RBP27.04■■□□□ 1.92
EFNA1-202ENST00000368407 BTKQ06187 659 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 CDC16Q13042 620 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 PMF1Q6P1K2 205 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 MAP7D3Q8IWC1 876 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 GPR65Q8IYL9 337 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 ZMIZ2Q8NF64 920 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 SMARCD1Q96GM5 515 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 CENPKQ9BS16 269 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 CNPY3Q9BT09 278 aa27.04■■□□□ 1.92
EFNA1-202ENST00000368407 C2orf71A6NGG8 1288 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 TPSB2P20231 275 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 AQP5P55064 265 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 STX3Q13277 289 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 TPSAB1Q15661 275 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 C1orf146Q5VVC0 180 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 RNF157Q96PX1 679 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 CPXM1Q96SM3 734 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.03■■□□□ 1.92
EFNA1-202ENST00000368407 PCDHB5Q9Y5E4 795 aa27.03■■□□□ 1.92
EFNA1-202ENST00000368407 PDLIM1O00151 329 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 ERBB2P04626 1255 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 IRX4P78413 519 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 CAND1Q86VP6 1230 aaKnown RBP27.02■■□□□ 1.92
EFNA1-202ENST00000368407 WDR75Q8IWA0 830 aaKnown RBP27.02■■□□□ 1.92
EFNA1-202ENST00000368407 CTAGE3PQ8IX95 158 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 GSDMBQ8TAX9 411 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 FAM172AQ8WUF8 416 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 CFAP36Q96G28 342 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 THTPAQ9BU02 230 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 CALN1Q9BXU9 219 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 S100A14Q9HCY8 104 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 VCX3AQ9NNX9 186 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 RAB6BQ9NRW1 208 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 FNIP2Q9P278 1114 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 COLQQ9Y215 455 aaPredicted RBP27.02■■□□□ 1.92
EFNA1-202ENST00000368407 SLC27A5Q9Y2P5 690 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 TRANK1O15050 2925 aa27.02■■□□□ 1.92
EFNA1-202ENST00000368407 MYO7AQ13402 2215 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms