RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 C2CD4DB7Z1M9 353 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 O00370 1275 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 WDR46O15213 610 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RANBP6O60518 1105 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 KRT34O76011 436 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CRTAMO95727 393 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 GLP2RO95838 553 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 NPPAP01160 153 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 LRG1P02750 347 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 GAAP10253 952 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ACSL1P33121 698 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 KCNJ4P48050 445 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 BLVRAP53004 296 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 KCNJ10P78508 379 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ALDH6A1Q02252 535 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ACY1Q03154 408 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CHRNDQ07001 517 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RIPK1Q13546 671 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CAMK2DQ13557 499 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ATP2B3Q16720 1220 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 DPY19L1Q2PZI1 675 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF792Q3KQV3 632 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 FBXO48Q5FWF7 155 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RTP2Q5QGT7 225 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 FAM26FQ5R3K3 315 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 BROXQ5VW32 411 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 OLFML2BQ68BL8 750 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 B3GNT6Q6ZMB0 384 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 PTCHD4Q6ZW05 846 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RBM23Q86U06 439 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CHD1LQ86WJ1 897 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CCDC83Q8IWF9 413 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ABI1Q8IZP0 508 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ARL14Q8N4G2 192 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 EFHBQ8N7U6 833 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RNF152Q8N8N0 203 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ANKS4BQ8N8V4 417 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 KIF18AQ8NI77 898 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RAPGEF5Q92565 580 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CDKL2Q92772 493 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 PHACTR3Q96KR7 559 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 ATP6V1G3Q96LB4 118 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CCDC140Q96MF4 163 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 LENG8Q96PV6 779 aaPredicted RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RAB3IPQ96QF0 476 aaPredicted RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 THUMPD3Q9BV44 507 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 NACAP1Q9BZK3 213 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 REXO4Q9GZR2 422 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 XKR8Q9H6D3 395 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RC3H2Q9HBD1 1191 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 SIRT3Q9NTG7 399 aaPredicted RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 MBNL3Q9NUK0 354 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 SIRT5Q9NXA8 310 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 TMOD2Q9NZR1 351 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CWC15Q9P013 229 aaKnown RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 FAM153AQ9UHL3 310 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 KLK13Q9UKR3 277 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC39A10Q9ULF5 831 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 RIMKLBQ9ULI2 386 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 KLHL20Q9Y2M5 609 aa3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 GPR55Q9Y2T6 319 aaPredicted RBP3.65□□□□□ -1.82
ECHDC1-205ENST00000368295 CDK5RAP2Q96SN8 1893 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 TRBV23OR9-2A0A075B6M9 112 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 A0A1W2PPC4 97 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 TMEM82A0PJX8 343 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 CCDC78A2IDD5 438 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 AGAP14A8MT82 685 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 H3BNC9 293 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 FGF10O15520 208 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 DLX3O60479 287 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM155BO75949 473 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 SERPINC1P01008 464 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 RNASE1P07998 156 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 SNRPB2P08579 225 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 POLR2MP0CAP2 368 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 IL1R1P14778 569 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 IFNGR1P15260 489 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 AGXTP21549 392 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 C5AR1P21730 350 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 CDH3P22223 829 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 FGFR4P22455 802 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 CTSSP25774 331 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 CSTF2P33240 577 aaKnown RBP eCLIP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 GRK5P34947 590 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 GDNFP39905 211 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 GP5P40197 560 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 GRIA2P42262 883 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 DPP6P42658 865 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 KIR2DL1P43626 348 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 KIR2DL2P43627 348 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 NT5C2P49902 561 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 STAT5BP51692 787 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 POLE2P56282 527 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 YBEYP58557 167 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 FOXO4P98177 505 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 CHRNEQ04844 493 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 SPAG1Q07617 926 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 RPA4Q13156 261 aa3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 TARBP2Q15633 366 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-205ENST00000368295 MAPKAPK3Q16644 382 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms