RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ERCC2P18074 760 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 SERPINH1P50454 418 aaKnown RBP22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 YBEYP58557 167 aaPredicted RBP22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 SLC20A2Q08357 652 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 DPYSQ14117 519 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 CCDC6Q16204 474 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 PLA2G2CQ5R387 149 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 RETSATQ6NUM9 610 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 C22orf39Q6P5X5 142 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 ARMCX6Q7L4S7 300 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 CCDC170Q8IYT3 715 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 OR2A12Q8NGT7 310 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 RFFLQ8WZ73 363 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 HMCESQ96FZ2 354 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 PABPC3Q9H361 631 aaKnown RBP22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 SERGEFQ9UGK8 458 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 SARDHQ9UL12 918 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 PCDHGA5Q9Y5G8 931 aa22.91■■□□□ 1.26
ECHDC1-203ENST00000368291 DOCK9Q9BZ29 2069 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 SOWAHDA6NJG2 315 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 RASA4BC9J798 803 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 MCF2LO15068 1137 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 RASA4O43374 803 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 KDELR3O43731 214 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 LRP3O75074 770 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 ACSL1P33121 698 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 ZNF135P52742 658 aaPredicted RBP22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 METAP1P53582 386 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 TAS2R40P59535 323 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 TCEAL1Q15170 157 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 ATP13A4Q4VNC1 1196 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 POLNQ7Z5Q5 900 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 FAM124AQ86V42 546 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 RHOT2Q8IXI1 618 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 ZNF419Q96HQ0 510 aaPredicted RBP22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 GPR174Q9BXC1 333 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 PCDH18Q9HCL0 1135 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 SCML1Q9UN30 329 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 SHROOM3Q8TF72 1996 aa22.9■■□□□ 1.26
ECHDC1-203ENST00000368291 RNASEH1O60930 286 aaKnown RBP22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 OXTRP30559 389 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 SLC8A1P32418 973 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 MPLP40238 635 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 MAGEA1P43355 309 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 PSMD8P48556 350 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 ARSEP51690 589 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 CREB5Q02930 508 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 SERINC3Q13530 473 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 MESDQ14696 234 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 AFMIDQ63HM1 303 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 KIAA2013Q8IYS2 634 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 AADATQ8N5Z0 425 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 NPWQ8N729 165 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 FAM71BQ8TC56 605 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 OR8D1Q8WZ84 308 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 TSC1Q92574 1164 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 SLC39A8Q9C0K1 460 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 TNKS2Q9H2K2 1166 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 SEMA4GQ9NTN9 838 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 TMEM74BQ9NUR3 256 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 PPM1HQ9ULR3 514 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 TFR2Q9UP52 801 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 FCF1Q9Y324 198 aaKnown RBP22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 MFHAS1Q9Y4C4 1052 aa22.89■■□□□ 1.26
ECHDC1-203ENST00000368291 ADAMTS9Q9P2N4 1935 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 RNF103O00237 685 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 ALOX15BO15296 676 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 NDUFS2O75306 463 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 CTSLP07711 333 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 ITPKAP23677 461 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 MAN1A1P33908 653 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 NDST2P52849 883 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 ZNF33AQ06730 810 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 PARP15Q460N3 678 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 TTC31Q49AM3 519 aaPredicted RBP22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 LEKR1Q6ZMV7 388 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 USP30Q70CQ3 517 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 TMTC1Q8IUR5 882 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 TMEM139Q8IV31 216 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 ARHGAP12Q8IWW6 846 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 SPC24Q8NBT2 197 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 CELF6Q96J87 481 aaKnown RBP22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 CSPG4P5Q96PW8 444 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 CEP44Q9C0F1 390 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 SMOC1Q9H4F8 434 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 ETNK2Q9NVF9 386 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 FBXL12Q9NXK8 326 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 IMPACTQ9P2X3 320 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 LCMT1Q9UIC8 334 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 PCDHA13Q9Y5I0 950 aa22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 EPN1Q9Y6I3 576 aaPredicted RBP22.89■■□□□ 1.25
ECHDC1-203ENST00000368291 A0A1W2PP55 124 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 TMEM110-MUSTN1A8MSY1 372 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 H3BRJ5 948 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 DAPK3O43293 454 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 BNIP3LO60238 219 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 ADH1BP00325 375 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 IL1BP01584 269 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 CD48P09326 243 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms