RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 MT-CO1P00395 513 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 ARL2P36404 184 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 FLT3P36888 993 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 MRPS6P82932 125 aaKnown RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 RETSATQ6NUM9 610 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 LPCAT1Q8NF37 534 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 OR52K1Q8NGK4 314 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 YME1L1Q96TA2 773 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 BBS2Q9BXC9 721 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 GIN1Q9NXP7 522 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 STK39Q9UEW8 545 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 COL14A1Q05707 1796 aaKnown RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 TSHRP16473 764 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 CRADDP78560 199 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 DUSP28Q4G0W2 176 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 HERC6Q8IVU3 1022 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 IL22Q9GZX6 179 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 MYLK2Q9H1R3 596 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 NMRAL1Q9HBL8 299 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 SMPD4Q9NXE4 827 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 ARMCX1Q9P291 453 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 UBDO15205 165 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 LRPAP1P30533 357 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 ICAM3P32942 547 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 CRYBB1P53674 252 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 NME5P56597 212 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 INHBEP58166 350 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 SPDYE7PQ495Y7 208 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 GALNTL6Q49A17 601 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 TBC1D19Q8N5T2 526 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 ACSS3Q9H6R3 686 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 MAFBQ9Y5Q3 323 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 C5orf58C9J3I9 102 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 CCT3P49368 545 aaKnown RBP13.46□□□□□ -0.25
PTPRK-204ENST00000368210 PRKAA2P54646 552 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 DDX39BQ13838 428 aaKnown RBP13.46□□□□□ -0.25
PTPRK-204ENST00000368210 AGKQ53H12 422 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 DEPDC1Q5TB30 811 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 CACHD1Q5VU97 1274 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 SCARA3Q6AZY7 606 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 C16orf46Q6P387 395 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 CCDC149Q6ZUS6 474 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
PTPRK-204ENST00000368210 GLMNQ92990 594 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 LENG9Q96B70 501 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 RGS18Q9NS28 235 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 MARCH2Q9P0N8 246 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 RABL2BQ9UNT1 228 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 ALOX15BO15296 676 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 TSC22D2O75157 780 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 BANF1O75531 89 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 PGM3O95394 542 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 GOT1P17174 413 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 HLA-DPA1P20036 260 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 PLIN5Q00G26 463 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 LRRC74AQ0VAA2 488 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 NCCRP1Q6ZVX7 275 aaPredicted RBP13.46□□□□□ -0.25
PTPRK-204ENST00000368210 PLEKHG4BQ96PX9 1271 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 CPXM1Q96SM3 734 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 MAF1Q9H063 256 aa13.46□□□□□ -0.25
PTPRK-204ENST00000368210 SYNDIG1LA6NDD5 238 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 PIAS1O75925 651 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 PSMA4P25789 261 aaKnown RBP13.46□□□□□ -0.26
PTPRK-204ENST00000368210 MATKP42679 507 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 NAA20P61599 178 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 PDK3Q15120 406 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 ATRNL1Q5VV63 1379 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 KYQ8NBH2 561 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 B3GALT6Q96L58 329 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 TUBGCP5Q96RT8 1024 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 TMEM79Q9BSE2 394 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 NXF3Q9H4D5 531 aaKnown RBP13.46□□□□□ -0.26
PTPRK-204ENST00000368210 MBD2Q9UBB5 411 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 SLIT2O94813 1529 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 PQBP1O60828 265 aaKnown RBP13.46□□□□□ -0.26
PTPRK-204ENST00000368210 AKR1D1P51857 326 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 FUT11Q495W5 492 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 PKN3Q6P5Z2 889 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 LGI2Q8N0V4 545 aa13.46□□□□□ -0.26
PTPRK-204ENST00000368210 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.26
PTPRK-204ENST00000368210 CLEC4MQ9H2X3 399 aaPredicted RBP13.46□□□□□ -0.26
PTPRK-204ENST00000368210 SNED1Q8TER0 1413 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 FGF10O15520 208 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-204ENST00000368210 USP2O75604 605 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-204ENST00000368210 SEMA3DO95025 777 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 PRLP01236 227 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 NEPROQ6NW34 567 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 TMC7Q7Z402 723 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 XPNPEP1Q9NQW7 623 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 TRNAU1APQ9NX07 287 aaKnown RBP13.45□□□□□ -0.26
PTPRK-204ENST00000368210 PTTG2Q9NZH5 202 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 ZSCAN9O15535 394 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-204ENST00000368210 DRD4P21917 467 aa13.45□□□□□ -0.26
PTPRK-204ENST00000368210 TUFMP49411 452 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms