RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ATXN7L3BQ96GX2 97 aa14.55□□□□□ -0.08
CD48-201ENST00000368045 SERPINI1Q99574 410 aa14.55□□□□□ -0.08
CD48-201ENST00000368045 PPP1R12CQ9BZL4 782 aa14.55□□□□□ -0.08
CD48-201ENST00000368045 KLHL4Q9C0H6 718 aa14.55□□□□□ -0.08
CD48-201ENST00000368045 WDCPQ9H6R7 721 aa14.55□□□□□ -0.08
CD48-201ENST00000368045 ANLNQ9NQW6 1124 aa14.55□□□□□ -0.08
CD48-201ENST00000368045 IARS2Q9NSE4 1012 aaKnown RBP14.55□□□□□ -0.08
CD48-201ENST00000368045 VPS28Q9UK41 221 aa14.55□□□□□ -0.08
CD48-201ENST00000368045 AAR2Q9Y312 384 aaKnown RBP14.55□□□□□ -0.08
CD48-201ENST00000368045 ZNF236Q9UL36 1845 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.54□□□□□ -0.08
CD48-201ENST00000368045 I6L893 689 aaPredicted RBP14.54□□□□□ -0.08
CD48-201ENST00000368045 GNAT1P11488 350 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 RPL14P50914 215 aaKnown RBP14.54□□□□□ -0.08
CD48-201ENST00000368045 SLC12A1Q13621 1099 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 FAM110CQ1W6H9 321 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 SEL1L3Q68CR1 1132 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 TWF2Q6IBS0 349 aaKnown RBP14.54□□□□□ -0.08
CD48-201ENST00000368045 RAPH1Q70E73 1250 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 BEND5Q7L4P6 421 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 TLK2Q86UE8 772 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 ZC3HC1Q86WB0 502 aaKnown RBP14.54□□□□□ -0.08
CD48-201ENST00000368045 CNTN4Q8IWV2 1026 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 NPLOC4Q8TAT6 608 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 ADAM32Q8TC27 787 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 STYXQ8WUJ0 223 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 PTCD2Q8WV60 388 aaKnown RBP14.54□□□□□ -0.08
CD48-201ENST00000368045 PYDC1Q8WXC3 89 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 SMARCD1Q96GM5 515 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 C1QTNF1Q9BXJ1 281 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 OSBPL2Q9H1P3 480 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
CD48-201ENST00000368045 CAB39LQ9H9S4 337 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 CHRAC1Q9NRG0 131 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 OR12D3Q9UGF7 316 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 BCAP29Q9UHQ4 241 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 SLC39A10Q9ULF5 831 aa14.54□□□□□ -0.08
CD48-201ENST00000368045 C17orf102A2RUQ5 167 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 RGSL1A5PLK6 1076 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 HHLA1C9JL84 531 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 E9PBE3 544 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 TREHO43280 583 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 KLHL41O60662 606 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 ANXA9O76027 345 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 PDE5AO76074 875 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 DDHD2O94830 711 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 JCHAINP01591 159 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 CCNCP24863 283 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 PCSK1P29120 753 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 CPT1AP50416 773 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 GRM3Q14832 879 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 DLG2Q15700 870 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 SMAD1Q15797 465 aaKnown RBP14.53□□□□□ -0.08
CD48-201ENST00000368045 PCID2Q5JVF3 399 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 BHLHA9Q7RTU4 235 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 SDCCAG8Q86SQ7 713 aaPredicted RBP14.53□□□□□ -0.08
CD48-201ENST00000368045 KBTBD6Q86V97 674 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 ZMIZ2Q8NF64 920 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 RP9Q8TA86 221 aaKnown RBP14.53□□□□□ -0.08
CD48-201ENST00000368045 ZSCAN18Q8TBC5 510 aaPredicted RBP14.53□□□□□ -0.08
CD48-201ENST00000368045 ZNF483Q8TF39 744 aaPredicted RBP14.53□□□□□ -0.08
CD48-201ENST00000368045 PDCD6IPQ8WUM4 868 aaKnown RBP14.53□□□□□ -0.08
CD48-201ENST00000368045 BRI3BPQ8WY22 251 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 GBP5Q96PP8 586 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 BTBD9Q96Q07 612 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 PARK7Q99497 189 aaKnown RBP14.53□□□□□ -0.08
CD48-201ENST00000368045 KATNAL1Q9BW62 490 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 TASP1Q9H6P5 420 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 CYP4F11Q9HBI6 524 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 CSNK1G1Q9HCP0 422 aa14.53□□□□□ -0.08
CD48-201ENST00000368045 LOC100653049A0A140TA62 436 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.52□□□□□ -0.08
CD48-201ENST00000368045 E2F8A0AVK6 867 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 KRT34O76011 436 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 LRIG2O94898 1065 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 USP17L7P0C7H9 530 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 PIK3R1P27986 724 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 NMBRP28336 390 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 HOXC8P31273 242 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 GMPRP36959 345 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 PEX19P40855 299 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 USP10Q14694 798 aaKnown RBP14.52□□□□□ -0.08
CD48-201ENST00000368045 PKN3Q6P5Z2 889 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 GPRIN1Q7Z2K8 1008 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 TMEM126BQ8IUX1 230 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 PIP4K2CQ8TBX8 421 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 MAPK15Q8TD08 544 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 GDPD5Q8WTR4 605 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 ZFAND2BQ8WV99 257 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 PCED1BQ96HM7 432 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 LENG8Q96PV6 779 aaPredicted RBP14.52□□□□□ -0.08
CD48-201ENST00000368045 OR52B2Q96RD2 323 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 OXCT2Q9BYC2 517 aaPredicted RBP14.52□□□□□ -0.08
CD48-201ENST00000368045 TKTL2Q9H0I9 626 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 MRM3Q9HC36 420 aaKnown RBP14.52□□□□□ -0.08
CD48-201ENST00000368045 MRGBPQ9NV56 204 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 C6orf203Q9P0P8 240 aaPredicted RBP14.52□□□□□ -0.08
CD48-201ENST00000368045 STK39Q9UEW8 545 aa14.52□□□□□ -0.08
CD48-201ENST00000368045 GOLGA8QA0A0J9YX86 632 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 MYBPHLA2RUH7 354 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms