RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 ANKRD13AQ8IZ07 590 aa12.45□□□□□ -0.42
SHPRH-202ENST00000367503 ATP6V1HQ9UI12 483 aa12.45□□□□□ -0.42
SHPRH-202ENST00000367503 RAP2CQ9Y3L5 183 aa12.45□□□□□ -0.42
SHPRH-202ENST00000367503 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
SHPRH-202ENST00000367503 EML1O00423 815 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 CYP2F1P24903 491 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 TUFMP49411 452 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ZPBP2Q6X784 338 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 TDRPQ86YL5 185 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ZNF540Q8NDQ6 660 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 HELQQ8TDG4 1101 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 PXMP2Q9NR77 195 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 SNX8Q9Y5X2 465 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 RAD54BQ9Y620 910 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 CD3EAPO15446 510 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 FBXO21O94952 628 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 STAG3L1P0CL83 205 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 EPHA3P29320 983 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 NR2C2P49116 596 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ABATP80404 500 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ORC1Q13415 861 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 LSAMPQ13449 338 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 TIGD7Q6NT04 549 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 UGT3A1Q6NUS8 523 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 KCNMB4Q86W47 210 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 FAM228AQ86W67 206 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 FAM131BQ86XD5 332 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 RTL3Q8N8U3 475 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 DEFB129Q9H1M3 183 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 DHX33Q9H6R0 707 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 PPLO60437 1756 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 A0A1W2PQ72 361 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 AVILO75366 819 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 RPS12P25398 132 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ILF2Q12905 390 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 MSLNQ13421 630 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 RALGPS1Q5JS13 557 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ANGEL2Q5VTE6 544 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 PALB2Q86YC2 1186 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 RAB43Q86YS6 212 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 FAM9CQ8IZT9 166 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 DSELQ8IZU8 1212 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 HM13Q8TCT9 377 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 HAS1Q92839 578 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ZDHHC18Q9NUE0 388 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 POLG2Q9UHN1 485 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 PPM1HQ9ULR3 514 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 SYNDIG1LA6NDD5 238 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 TFECO14948 347 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 NAGLUP54802 743 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 PLCL1Q15111 1095 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 TSNQ15631 228 aaKnown RBP12.44□□□□□ -0.42
SHPRH-202ENST00000367503 PPM1LQ5SGD2 360 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ANKRD23Q86SG2 305 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 ZNF605Q86T29 641 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 PHF24Q9UPV7 400 aa12.44□□□□□ -0.42
SHPRH-202ENST00000367503 SPATA31A5Q5VU36 1347 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 SPATA31A7Q8IWB4 1347 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ZC3H4Q9UPT8 1303 aaKnown RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 IL6P05231 212 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 CRABP2P29373 138 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 RRM2P31350 389 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 PPP3CAQ08209 521 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 PPIL2Q13356 520 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 NFIL3Q16649 462 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ZNF544Q6NX49 715 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 C10orf107Q8IVU9 208 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 FAM71AQ8IYT1 594 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 SH3KBP1Q96B97 665 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 MYOZ2Q9NPC6 264 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 DNAJC28Q9NX36 388 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 TRMT6Q9UJA5 497 aaKnown RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 CYP3A7-CYP3A51PA0A087WV96 503 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 BOLA2-SMG1P6H3BVE0 249 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 JCHAINP01591 159 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ACO1P21399 889 aaKnown RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 CYP3A7P24462 503 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 WDR4P57081 412 aaKnown RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 DLG1Q12959 904 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ANGPT1Q15389 498 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ZDHHC24Q6UX98 284 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 CHSY1Q86X52 802 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 PARP8Q8N3A8 854 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 RAB2BQ8WUD1 216 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 RNFT2Q96EX2 444 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 APOL2Q9BQE5 337 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ELP3Q9H9T3 547 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 SYTL2Q9HCH5 934 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 TRPV5Q9NQA5 729 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 SAE1Q9UBE0 346 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 PCDHA11Q9Y5I1 949 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 ANKRD63C9JTQ0 380 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 NOS1APO75052 506 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 CCNE2O96020 404 aa12.43□□□□□ -0.42
SHPRH-202ENST00000367503 CDK9P50750 372 aaKnown RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 MARSP56192 900 aaKnown RBP12.43□□□□□ -0.42
SHPRH-202ENST00000367503 MYBPC3Q14896 1274 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms