RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 BBS1Q8NFJ9 593 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 TMEM143Q96AN5 459 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 QRFPRQ96P65 431 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 DDX47Q9H0S4 455 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 TUBB1Q9H4B7 451 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SERHL2Q9H4I8 314 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 DMTF1Q9Y222 760 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 TNS2Q63HR2 1409 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 MEN1O00255 615 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 EEF2KO00418 725 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 FOXP2O15409 715 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SRP72O76094 671 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 IL1BP01584 269 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ALOX5P09917 674 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 PDHBP11177 359 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 BMP4P12644 408 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ALOX12P18054 663 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ELK3P41970 407 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 GAD2Q05329 585 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SYT16Q17RD7 645 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 C16orf86Q6ZW13 317 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 RNF135Q8IUD6 432 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CCDC28AQ8IWP9 274 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ELMOD2Q8IZ81 293 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 PIGOQ8TEQ8 1089 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 HEXDCQ8WVB3 486 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 GATAD2BQ8WXI9 593 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 TMEM125Q96AQ2 219 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 MNTQ99583 582 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 OSMRQ99650 979 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 LMAN2LQ9H0V9 348 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 NPHS2Q9NP85 383 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 KLHL1Q9NR64 748 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 LIMA1Q9UHB6 759 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 TRIM3O75382 744 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ANXA9O76027 345 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 HOXB8P17481 243 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ACO1P21399 889 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SLC1A1P43005 524 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 GPD2P43304 727 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 YWHAZP63104 245 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 LRRC63Q05C16 580 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF543Q08ER8 600 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 PDIA2Q13087 525 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 FUT11Q495W5 492 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 PLCZ1Q86YW0 608 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CCDC36Q8IYA8 594 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 NUP93Q8N1F7 819 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 HPDLQ96IR7 371 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SERPINB11Q96P15 392 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 PNKPQ96T60 521 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CDCA3Q99618 268 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 EHD4Q9H223 541 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ZC3H7BQ9UGR2 993 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 NOX1Q9Y5S8 564 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 MED1Q15648 1581 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 A0A1W2PQ67 120 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CDH16O75309 829 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 VIPP01282 170 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 RB1P06400 928 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 GNA15P30679 374 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 KCNJ5P48544 419 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 PTK6Q13882 451 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 LONRF1Q17RB8 773 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 IGSF11Q5DX21 431 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 AGBL2Q5U5Z8 902 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 USP45Q70EL2 814 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 FBXO33Q7Z6M2 555 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 LRRC71Q8N4P6 559 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ZHX1-C8orf76Q96EF9 292 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SNF8Q96H20 258 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 FUBP3Q96I24 572 aaKnown RBP eCLIP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SLC38A3Q99624 504 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 AIFM2Q9BRQ8 373 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 HERC2P3Q9BVR0 1158 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 TRNAU1APQ9NX07 287 aaKnown RBP8.76□□□□□ -1.01
SYNE1-206ENST00000367253 SAGE1Q9NXZ1 904 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 DPP3Q9NY33 737 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CD207Q9UJ71 328 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ADAM30Q9UKF2 790 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 CDC14AQ9UNH5 594 aa8.76□□□□□ -1.01
SYNE1-206ENST00000367253 ATP1A3P13637 1013 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 TALDO1P37837 337 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PLGLB1Q02325 96 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 LRP8Q14114 963 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 TMEM31Q5JXX7 168 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 RASSF6Q6ZTQ3 369 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 EXOC3L1Q86VI1 746 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ARHGEF19Q8IW93 802 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ZBED8Q8IZ13 594 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 SH2D3CQ8N5H7 860 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 LENG9Q96B70 501 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 C18orf8Q96DM3 657 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 NSL1Q96IY1 281 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 DUSP9Q99956 384 aaKnown RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 KLHL28Q9NXS3 571 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 DDTLA6NHG4 134 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 H3BNH8 94 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 H7C0S8 307 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms