RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PHF21BQ96EK2 531 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ELMO2Q96JJ3 720 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 SIK2Q9H0K1 926 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 R3HDMLQ9H3Y0 253 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 PTPRHQ9HD43 1115 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 PGAP2Q9UHJ9 254 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 MID2Q9UJV3 735 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 KIAA1257Q9ULG3 409 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 DMTF1Q9Y222 760 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 RAP2CQ9Y3L5 183 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ANKRD12Q6UB98 2062 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 RNF103-CHMP3A0A140T963 221 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 NEMP2A6NFY4 417 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 IRF6O14896 467 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 TIMM44O43615 452 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 TRMUO75648 421 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 MCF2P10911 925 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 RPL10P27635 214 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 BAG6P46379 1132 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 MAPK10P53779 464 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 BST2Q10589 180 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 PRKAA1Q13131 559 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 KIF19Q2TAC6 998 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ZFP1Q6P2D0 407 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 IFNEQ86WN2 208 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ZNF354CQ86Y25 554 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ZNF786Q8N393 782 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 IPMKQ8NFU5 416 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 TMIGD2Q96BF3 282 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 HSPBAP1Q96EW2 488 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 HAUS8Q9BT25 410 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 SPATC1LQ9H0A9 340 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 NOL11Q9H8H0 719 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 COQ10BQ9H8M1 238 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 RAB26Q9ULW5 256 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 PRPF19Q9UMS4 504 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 AP4S1Q9Y587 144 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 BRCA1P38398 1863 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 EVPLQ92817 2033 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 IGKV6D-21A0A0A0MT36 114 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 DFFAO00273 331 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ZNF195O14628 629 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 CASQ2O14958 399 aaPredicted RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 RNASEH2AO75792 299 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 FBXO21O94952 628 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 MPOP05164 745 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 MLNP12872 115 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 CKMT2P17540 419 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 NFKB1P19838 968 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 NMBRP28336 390 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 CASP2P42575 452 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 NDUFV1P49821 464 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 BCAT1P54687 386 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 NR1H2P55055 460 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 DCTN2Q13561 401 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 C16orf72Q14CZ0 275 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 LIPMQ5VYY2 423 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 PDZD4Q76G19 769 aaPredicted RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 MARVELD2Q8N4S9 558 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 SLC35F5Q8WV83 523 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 KLHL32Q96NJ5 620 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 SLC39A3Q9BRY0 314 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 DNAAF2Q9NVR5 837 aaKnown RBP8.32□□□□□ -1.08
CD46-208ENST00000367042 MTMR10Q9NXD2 777 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ERAP1Q9NZ08 941 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 V9GYQ6 96 aa8.32□□□□□ -1.08
CD46-208ENST00000367042 ZNF839A8K0R7 811 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 C9JVG2 144 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 G3V2L1 256 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 FOXD2O60548 495 aaPredicted RBP8.31□□□□□ -1.08
CD46-208ENST00000367042 ALDH1A2O94788 518 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 DDHD2O94830 711 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 ERCC2P18074 760 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 PROZP22891 400 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 PSME3P61289 254 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 ESRRGP62508 458 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 HPCAP84074 193 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 CSHL1Q14406 222 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 GRM2Q14416 872 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 CELF3Q5SZQ8 465 aaKnown RBP8.31□□□□□ -1.08
CD46-208ENST00000367042 ZNF618Q5T7W0 954 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 ITPRIPL1Q6GPH6 555 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 ZBTB49Q6ZSB9 765 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 CTU1Q7Z7A3 348 aaKnown RBP8.31□□□□□ -1.08
CD46-208ENST00000367042 DEFB132Q7Z7B7 95 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 TMEM110Q86TL2 294 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 SETD3Q86TU7 594 aaPredicted RBP8.31□□□□□ -1.08
CD46-208ENST00000367042 PIGZQ86VD9 579 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 CLVS1Q8IUQ0 354 aaPredicted RBP8.31□□□□□ -1.08
CD46-208ENST00000367042 PSTKQ8IV42 348 aaKnown RBP8.31□□□□□ -1.08
CD46-208ENST00000367042 DENND6AQ8IWF6 608 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 FSTL5Q8N475 847 aaPredicted RBP8.31□□□□□ -1.08
CD46-208ENST00000367042 MTMR14Q8NCE2 650 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 BEST2Q8NFU1 509 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 GRIN3AQ8TCU5 1115 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 DDI1Q8WTU0 396 aa8.31□□□□□ -1.08
CD46-208ENST00000367042 KHSRPQ92945 711 aaKnown RBP eCLIP8.31□□□□□ -1.085e-9■■□□□ 13.8
CD46-208ENST00000367042 OTUD5Q96G74 571 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms