RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PAGE5Q96GU1 130 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 GAD1Q99259 594 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 PYM1Q9BRP8 204 aaKnown RBP8.37□□□□□ -1.07
YBX3-204ENST00000366290 KIFC3Q9BVG8 833 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 VN1R3Q9BXE9 311 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 TRIM6Q9C030 488 aaPredicted RBP8.37□□□□□ -1.07
YBX3-204ENST00000366290 ZBP1Q9H171 429 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 NELFAQ9H3P2 528 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 MAGEF1Q9HAY2 307 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 DNAJB4Q9UDY4 337 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 RUVBL1Q9Y265 456 aaKnown RBP8.37□□□□□ -1.07
YBX3-204ENST00000366290 TNFSF13BQ9Y275 285 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 HES2Q9Y543 173 aa8.37□□□□□ -1.07
YBX3-204ENST00000366290 ZNF318Q5VUA4 2279 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 GOLGA6L4A6NEF3 574 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 HIDE1A8MVS5 230 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 K7ERI5 159 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 KLRC4O43908 158 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 CTSAP10619 480 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 MALP21145 153 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 ALDH1A3P47895 512 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 NRIP1P48552 1158 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 PEX3P56589 373 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 RNASELQ05823 741 aaKnown RBP8.36□□□□□ -1.07
YBX3-204ENST00000366290 GRIK3Q13003 919 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 DUSP8Q13202 625 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 SMC1AQ14683 1233 aaKnown RBP8.36□□□□□ -1.07
YBX3-204ENST00000366290 NAB2Q15742 525 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 DCAF4L1Q3SXM0 396 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 XKR4Q5GH76 650 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 ATF7IP2Q5U623 682 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 PPP4R4Q6NUP7 873 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 APBB1IPQ7Z5R6 666 aaPredicted RBP8.36□□□□□ -1.07
YBX3-204ENST00000366290 VPS52Q8N1B4 723 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 SMRP1Q8NCR6 262 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 TMEM161BQ8NDZ6 487 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 VN1R2Q8NFZ6 395 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 TIGD1Q96MW7 591 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 ADPGKQ9BRR6 497 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 FGFBP2Q9BYJ0 223 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 KCNH6Q9H252 994 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 EPC1Q9H2F5 836 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 BLZF1Q9H2G9 400 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 TLE6Q9H808 572 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 MARCH5Q9NX47 278 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 MIOSQ9NXC5 875 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 FAM50BQ9Y247 325 aa8.36□□□□□ -1.07
YBX3-204ENST00000366290 PDCD11Q14690 1871 aaKnown RBP8.36□□□□□ -1.07
YBX3-204ENST00000366290 DMDP11532 3685 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 CCDC169A6NNP5 214 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 NT5C1B-RDH14C9J2C7 533 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 H0YCG3 227 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 LINC01565O15544 149 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 TEX33O43247 280 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 HOXA3O43365 443 aaPredicted RBP8.35□□□□□ -1.07
YBX3-204ENST00000366290 C1RP00736 705 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 POMCP01189 267 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 RAP2AP10114 183 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 ABCD1P33897 745 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 SCNN1GP51170 649 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 RAB1AP62820 205 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 FAM214AQ32MH5 1076 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 COBLL1Q53SF7 1204 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 FAM111BQ6SJ93 734 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 ALKAL1Q6UXT8 129 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 TAX1BP1Q86VP1 789 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 CDR2LQ86X02 465 aaPredicted RBP8.35□□□□□ -1.07
YBX3-204ENST00000366290 SFR1Q86XK3 245 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 ELOA2Q8IYF1 753 aaPredicted RBP8.35□□□□□ -1.07
YBX3-204ENST00000366290 CEP57L1Q8IYX8 460 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 PJA1Q8NG27 643 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 SUSD6Q92537 303 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 SLC35A4Q96G79 324 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 GNRHR2Q96P88 292 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 STRA6Q9BX79 667 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 ST6GALNAC4Q9H4F1 302 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 PARVGQ9HBI0 331 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 ENTPD7Q9NQZ7 604 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 LARSQ9P2J5 1176 aaKnown RBP8.35□□□□□ -1.07
YBX3-204ENST00000366290 CD207Q9UJ71 328 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 L1RE1Q9UN81 338 aa8.35□□□□□ -1.07
YBX3-204ENST00000366290 MTCL1Q9Y4B5 1905 aaKnown RBP8.35□□□□□ -1.07
YBX3-204ENST00000366290 MYO15AQ9UKN7 3530 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 A0A088AWK7 358 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 CAPN8A6NHC0 703 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 CXorf49A8MYA2 514 aaPredicted RBP8.34□□□□□ -1.07
YBX3-204ENST00000366290 H3BUI4 141 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 PTGESO14684 152 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 PER2O15055 1255 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 SLC16A4O15374 487 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 MBTPS2O43462 519 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 TOM1L1O75674 476 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 RECQL4O94761 1208 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 PIGRP01833 764 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 MCF2P10911 925 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 TYRP14679 529 aa8.34□□□□□ -1.07
YBX3-204ENST00000366290 HOXB8P17481 243 aaPredicted RBP8.34□□□□□ -1.07
YBX3-204ENST00000366290 RPS19P39019 145 aaKnown RBP8.34□□□□□ -1.07
YBX3-204ENST00000366290 NDUFV1P49821 464 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms