RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 IL25Q9H293 177 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 CERS4Q9HA82 394 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 SLC39A10Q9ULF5 831 aa2.55□□□□□ -2
RNU4-42P-201ENST00000364738 IGLV5-52A0A0A0MRZ9 124 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 IGHV4-28A0A0C4DH34 117 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 PRR23AA6NEV1 266 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 RASA4BC9J798 803 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 EYA2O00167 538 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 APAF1O14727 1248 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 RASA4O43374 803 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 DNPH1O43598 174 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 ASNA1O43681 348 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 CLDN7O95471 211 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 HLA-DQA2P01906 255 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 SP1P08047 785 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 MMP3P08254 477 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 PRPH2P23942 346 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 PRKCHP24723 683 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 TYK2P29597 1187 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 CLCNKBP51801 687 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 DDR1Q08345 913 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 ACSM2AQ08AH3 577 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 SNTA1Q13424 505 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 PKP1Q13835 747 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 LONRF1Q17RB8 773 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 BTBD16Q32M84 506 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 EFHC1Q5JVL4 640 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 IZUMO3Q5VZ72 239 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 RETSATQ6NUM9 610 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 KIAA1324Q6UXG2 1013 aaKnown RBP2.54□□□□□ -2
RNU4-42P-201ENST00000364738 RNF144BQ7Z419 303 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 VPS52Q8N1B4 723 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 NEXN-AS1Q8NBZ9 246 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 TMEM163Q8TC26 289 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 MUL1Q969V5 352 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 TXNDC15Q96J42 360 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 RIPOR3Q96MK2 946 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 PKP4Q99569 1192 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 IFT27Q9BW83 186 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 NAA15Q9BXJ9 866 aaKnown RBP2.54□□□□□ -2
RNU4-42P-201ENST00000364738 TP63Q9H3D4 680 aaPredicted RBP2.54□□□□□ -2
RNU4-42P-201ENST00000364738 TMEM248Q9NWD8 314 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 DONSONQ9NYP3 566 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 IGSF9Q9P2J2 1179 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 CDH22Q9UJ99 828 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 AGO1Q9UL18 857 aaKnown RBP2.54□□□□□ -2
RNU4-42P-201ENST00000364738 CNTN6Q9UQ52 1028 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 LZTS1Q9Y250 596 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 PCDHGB2Q9Y5G2 931 aa2.54□□□□□ -2
RNU4-42P-201ENST00000364738 C17orf102A2RUQ5 167 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 TMEM247A6NEH6 219 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 GRM8O00222 908 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 BMPR1BO00238 502 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 ENO3P13929 434 aaPredicted RBP2.53□□□□□ -2
RNU4-42P-201ENST00000364738 GSTM2P28161 218 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 RFC1P35251 1148 aaPredicted RBP2.53□□□□□ -2
RNU4-42P-201ENST00000364738 PCP4P48539 62 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 ZACNQ401N2 412 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 GXYLT1Q4G148 440 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 SYTL3Q4VX76 610 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 MEX3BQ6ZN04 569 aaKnown RBP2.53□□□□□ -2
RNU4-42P-201ENST00000364738 FMNL3Q8IVF7 1028 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 CCAR1Q8IX12 1150 aaKnown RBP2.53□□□□□ -2
RNU4-42P-201ENST00000364738 UBE2Q2Q8WVN8 375 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 FAR1Q8WVX9 515 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 WBP2Q969T9 261 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 IL17FQ96PD4 163 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 FRG2BQ96QU4 278 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 EPYCQ99645 322 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 SLC25A33Q9BSK2 321 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 STK33Q9BYT3 514 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 TRIM31Q9BZY9 425 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 LHPPQ9H008 270 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 SDF2L1Q9HCN8 221 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 PDE11AQ9HCR9 933 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 LIN7CQ9NUP9 197 aaKnown RBP2.53□□□□□ -2
RNU4-42P-201ENST00000364738 SEL1LQ9UBV2 794 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 MALT1Q9UDY8 824 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 PCDHA10Q9Y5I2 948 aa2.53□□□□□ -2
RNU4-42P-201ENST00000364738 SAA2-SAA4A0A096LPE2 208 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 FAM90A18PA6NE21 464 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 FAM90A16PA6NEW6 464 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 DDTLA6NHG4 134 aaPredicted RBP2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 AQP12BA6NM10 295 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 FAM90A9PA6NNJ1 464 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 FAM90A5PA8MXJ8 464 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 KDM4EB2RXH2 506 aaPredicted RBP2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 HSPB6O14558 160 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 RNMTO43148 476 aaKnown RBP2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 PLA2G6O60733 806 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 HEXIM1O94992 359 aaKnown RBP2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 DDAH2O95865 285 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 FAM90A15PP0C7V4 464 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 FAM90A14PP0C7W9 464 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 TM4SF4P48230 202 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 MXI1P50539 228 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 CDK18Q07002 472 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 ALKBH1Q13686 389 aaKnown RBP2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 CTTNQ14247 550 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms