RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 UBE2Q1Q7Z7E8 422 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 OR10T2Q8NGX3 314 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 CPT1BQ92523 772 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 RILPQ96NA2 401 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 ACBD6Q9BR61 282 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 FTHL17Q9BXU8 183 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 CEP44Q9C0F1 390 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 PAIP1Q9H074 479 aaKnown RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 MYLK2Q9H1R3 596 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 PSMC3IPQ9P2W1 217 aaPredicted RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 SHOC2Q9UQ13 582 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 SMIM31A0A1B0GVY4 71 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 WDR27A2RRH5 827 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 CCDC22O60826 627 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 CCL5P13501 91 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 MGAT1P26572 445 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 TAF10Q12962 218 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 DNAJC3Q13217 504 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 NOMO1Q15155 1222 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 PSMD5Q16401 504 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 CYP1B1Q16678 543 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 RAP1GAP2Q684P5 730 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 CCSAPQ6IQ19 270 aaPredicted RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 TRNP1Q6NT89 227 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 TAC4Q86UU9 113 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 PDZD8Q8NEN9 1154 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 TRIM56Q9BRZ2 755 aaKnown RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 TMLHEQ9NVH6 421 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 GMIPQ9P107 970 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 GON4LQ3T8J9 2241 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 BRCA1P38398 1863 aaKnown RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 C3orf70A6NLC5 250 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 DAB1O75553 588 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 NAT2P11245 290 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 ASPHQ12797 758 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 FOXD4Q12950 439 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 SLC45A4Q5BKX6 768 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 SLC2A7Q6PXP3 512 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 LRRTM3Q86VH5 581 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 CFAP52Q8N1V2 620 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 AGR3Q8TD06 166 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 CENPTQ96BT3 561 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 GRAMD1AQ96CP6 724 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 CLIP3Q96DZ5 547 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 P2RY11Q96G91 374 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 FCRL2Q96LA5 508 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 ZNF670Q9BS34 389 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 UNKQ9C0B0 810 aaKnown RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 C12orf65Q9H3J6 166 aaKnown RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 DENND2DQ9H6A0 471 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 LRRC4CQ9HCJ2 640 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ARHGEF4Q9NR80 690 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ATAD3AQ9NVI7 634 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 RBM22Q9NW64 420 aaKnown RBP eCLIP9.34□□□□□ -0.914e-7■■■■□ 26.5
CALD1-202ENST00000361901 MARCH2Q9P0N8 246 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 PAPPA2Q9BXP8 1791 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 SF3B1O75533 1304 aaKnown RBP eCLIP9.34□□□□□ -0.91
CALD1-202ENST00000361901 LOXHD1Q8IVV2 1947 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 KCNA4P22459 653 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ECHS1P30084 290 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 L1CAMP32004 1257 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 GRIA1P42261 906 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 GEMIN4P57678 1058 aaKnown RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 RALGDSQ12967 914 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 PLD1Q13393 1074 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 TRIM60Q495X7 471 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ITPRIPL1Q6GPH6 555 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 FUT10Q6P4F1 479 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 SATL1Q86VE3 508 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 TP53INP2Q8IXH6 220 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 NUP93Q8N1F7 819 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 DCLK2Q8N568 766 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 FAM136AQ96C01 138 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 DGCR14Q96DF8 476 aaKnown RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 SERPINB12Q96P63 405 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ROPN1BQ9BZX4 212 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 CATSPERBQ9H7T0 1116 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ROPN1Q9HAT0 212 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 TRNAU1APQ9NX07 287 aaKnown RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 FIS1Q9Y3D6 152 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 NME7Q9Y5B8 376 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 TMEM221A6NGB7 291 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 TYK2P29597 1187 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 LRPAP1P30533 357 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 INHBCP55103 352 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 MAXP61244 160 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 TMPRSS15P98073 1019 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 KLF1Q13351 362 aaPredicted RBP9.34□□□□□ -0.91
CALD1-202ENST00000361901 OLIG2Q13516 323 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ZNF235Q14590 738 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 POU6F1Q14863 301 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 STRADAQ7RTN6 431 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 LRRC6Q86X45 466 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 NIPA2Q8N8Q9 360 aa9.34□□□□□ -0.91
CALD1-202ENST00000361901 ICA1LQ8NDH6 482 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms