RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 UBTFL6P0CB48 400 aaPredicted RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 SPRP35270 261 aaPredicted RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 GNL1P36915 607 aaPredicted RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 AFF1P51825 1210 aaKnown RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 ASPHQ12797 758 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 CCNIQ14094 377 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 PPM1JQ5JR12 505 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 EPGNQ6UW88 154 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 CRIPAKQ8N1N5 446 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 PYROXD2Q8N2H3 581 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 CERS2Q96G23 380 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 SYBUQ9NX95 663 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 SLC17A6Q9P2U8 582 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 CDH22Q9UJ99 828 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 LRFN2Q9ULH4 789 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 MFHAS1Q9Y4C4 1052 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 NR2E3Q9Y5X4 410 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 FNDC1Q4ZHG4 1894 aaPredicted RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 MEI4A8MW99 385 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 PEX1O43933 1283 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 EFCAB14O75071 495 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 MPOP05164 745 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 ACAT1P24752 427 aaKnown RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 LRPAP1P30533 357 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 ARRB2P32121 409 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 IFRD2Q12894 506 aaPredicted RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
UBA3-202ENST00000361055 C9orf57Q5W0N0 161 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 ACAD11Q709F0 780 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 C7orf61Q8IZ16 206 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 FBXW8Q8N3Y1 598 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 LPIN3Q9BQK8 851 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 KLHL4Q9C0H6 718 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 LRRC40Q9H9A6 602 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 ARHGAP26Q9UNA1 814 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 INPP5FQ9Y2H2 1132 aa12.64□□□□□ -0.39
UBA3-202ENST00000361055 TMEM114B3SHH9 223 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 PIRO00625 290 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 HOXA2O43364 376 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 MFSD11O43934 449 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 H2AFYO75367 372 aaKnown RBP12.63□□□□□ -0.39
UBA3-202ENST00000361055 USP1O94782 785 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 POMCP01189 267 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 ERVK-10P10266 1014 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 NCF2P19878 526 aaPredicted RBP12.63□□□□□ -0.39
UBA3-202ENST00000361055 ITGA9Q13797 1035 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 CLLU1OSQ5K130 101 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RNF111Q6ZNA4 994 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 NPAS4Q8IUM7 802 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 DEFB106AQ8N104 65 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 ZNF567Q8N184 647 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 URGCPQ8TCY9 931 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 SLC26A7Q8TE54 656 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 SREK1Q8WXA9 508 aaKnown RBP12.63□□□□□ -0.39
UBA3-202ENST00000361055 PYDC1Q8WXC3 89 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RSPH1Q8WYR4 309 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 NT5C3BQ969T7 300 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RBBP8Q99708 897 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RTKNQ9BST9 563 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 CDH19Q9H159 772 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 GOLGA2P5Q9HBQ8 144 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 IL23AQ9NPF7 189 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 SNX15Q9NRS6 342 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 POMPQ9Y244 141 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RPS6KL1Q9Y6S9 549 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 MAGEB16A2A368 324 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 CASQ2O14958 399 aaPredicted RBP12.63□□□□□ -0.39
UBA3-202ENST00000361055 PDGFRBP09619 1106 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 COX4I1P13073 169 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 UQCRBP14927 111 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 ITGAXP20702 1163 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 PSMB4P28070 264 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 ADORA2BP29275 332 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 PNPLA4P41247 253 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 NUMBP49757 651 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 SERPINB8P50452 374 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■□□ 18.2
UBA3-202ENST00000361055 RBBP5Q15291 538 aaKnown RBP12.63□□□□□ -0.39
UBA3-202ENST00000361055 NOMO2Q5JPE7 1267 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RAPH1Q70E73 1250 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 PID1Q7Z2X4 250 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 BNIPLQ7Z465 357 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 FAM131BQ86XD5 332 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 DEFB107AQ8IZN7 70 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 ABI1Q8IZP0 508 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 DCLK2Q8N568 766 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 CCNYQ8ND76 341 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RNF139Q8WU17 664 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 ZNF560Q96MR9 790 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 FCRL3Q96P31 734 aaPredicted RBP12.63□□□□□ -0.39
UBA3-202ENST00000361055 TUBGCP5Q96RT8 1024 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms