RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PON1P27169 355 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 AMPD2Q01433 879 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 SNIP1Q8TAD8 396 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 FBXO32Q969P5 355 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 SLC35C2Q9NQQ7 365 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 NR2F6P10588 404 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 PTDSS1P48651 473 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ARF3P61204 181 aaPredicted RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 POLR2LP62875 67 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 S100A12P80511 92 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ARF1P84077 181 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 TRMT11Q7Z4G4 463 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 SNX32Q86XE0 403 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ELL3Q9HB65 397 aaPredicted RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 PCDHGA10Q9Y5H3 936 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 PLK4O00444 970 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 IFNGP01579 166 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 COX7A2P14406 83 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ITGB6P18564 788 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ZC2HC1CQ53FD0 456 aaPredicted RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 SULT1C3Q6IMI6 304 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 RHOBTB2Q9BYZ6 727 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 SNX7Q9UNH6 387 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 VIL1P09327 827 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 MAPK10P53779 464 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 MED22Q15528 200 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF607Q96SK3 696 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 MED28Q9H204 178 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ULK1O75385 1050 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 DBTP11182 482 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 GP5P40197 560 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 GRIA3P42263 894 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 CEBPGP53567 150 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 UGT2B15P54855 530 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 MPP2Q14168 576 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 POU6F1Q14863 301 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 OAFQ86UD1 273 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 TMIEQ8NEW7 156 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 GAL3ST3Q96A11 431 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 SP140LQ9H930 580 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF214Q9UL59 606 aaPredicted RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 PLA2G4CQ9UP65 541 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 USP6P35125 1406 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 FOXN1O15353 648 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ALDH5A1P51649 535 aaPredicted RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 MYBPC1Q00872 1141 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 RAET1EQ8TD07 263 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ANKEF1Q9NU02 776 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 FAM240BA0A1B0GVZ2 78 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 CYP11B1P15538 503 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 RPA1P27694 616 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 CRATP43155 626 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 FAXCQ5TGI0 409 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 RAB11FIP2Q7L804 512 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 GLT6D1Q7Z4J2 308 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 AKAP8O43823 692 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 KRT33AO76009 404 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 IL18R1Q13478 541 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 TOMM20Q15388 145 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 HECTD3Q5T447 861 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 BRINP3Q76B58 766 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 PTAR1Q7Z6K3 402 aaPredicted RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 SLC6A15Q9H2J7 730 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 PSME2Q9UL46 239 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 EFR3BQ9Y2G0 817 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 MCIDASD6RGH6 385 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ZDHHC17Q8IUH5 632 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 GJD3Q8N144 294 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 CPVLQ9H3G5 476 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 COL15A1P39059 1388 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 FAM196BA6NMK8 535 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 WRBO00258 174 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 OPLAHO14841 1288 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 RPL10AP62906 217 aaKnown RBP9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ZFP28Q8NHY6 868 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF398Q8TD17 642 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 CD101Q93033 1021 aa9.42□□□□□ -0.9
VPS13A-203ENST00000360280 IGSF1Q8N6C5 1336 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 RPLP2P05387 115 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TYMPP19971 482 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TUBA1BP68363 451 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 OCLNQ16625 522 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TUBA1AQ71U36 451 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 GPALPP1Q8IXQ4 340 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 FBXO25Q8TCJ0 367 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 NELL1Q92832 810 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 POMKQ9H5K3 350 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CARD8Q9Y2G2 431 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 SQLEQ14534 574 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF613Q6PF04 617 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TCP10LQ8TDR4 215 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 FAR1Q8WVX9 515 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 SYNPO2Q9UMS6 1093 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ASTN2O75129 1339 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 PRH1P02810 166 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF615Q8N8J6 731 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ACSF2Q96CM8 615 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms