RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 HACD3Q9P035 362 aa15.17■□□□□ 0.02
UBAP1-202ENST00000359544 TMEM9Q9P0T7 183 aa15.17■□□□□ 0.02
UBAP1-202ENST00000359544 SNX13Q9Y5W8 968 aa15.17■□□□□ 0.02
UBAP1-202ENST00000359544 CCDC85CA6NKD9 419 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ELNP15502 786 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 SLC7A1P30825 629 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 FCGRTP55899 365 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 TRIM25Q14258 630 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 PPP6R3Q5H9R7 873 aaPredicted RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 MTX3Q5HYI7 312 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 NHSL2Q5HYW2 709 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 XYLT1Q86Y38 959 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ZNF786Q8N393 782 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 TMA16Q96EY4 203 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 DUS3LQ96G46 650 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 NPLQ9BXD5 320 aaPredicted RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 TDRD1Q9BXT4 1180 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ZBTB26Q9HCK0 441 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 C20orf96Q9NUD7 363 aaPredicted RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 UTP6Q9NYH9 597 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ADA2Q9NZK5 511 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 MORF4L1Q9UBU8 362 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 MID2Q9UJV3 735 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 SLC30A1Q9Y6M5 507 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 DOCK3Q8IZD9 2030 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 RLFQ13129 1914 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 CFAP99D6REC4 459 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 VWA5AO00534 786 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 NEMP1O14524 444 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 FOXD2O60548 495 aaPredicted RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 SNAP91O60641 907 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 TRIM13O60858 407 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 CSPG5O95196 566 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 TCN1P20061 433 aaPredicted RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 FGFR3P22607 806 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 S100A1P23297 94 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 PSMD8P48556 350 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 FLT3LGP49771 235 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 TRAP1Q12931 704 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 NR1D2Q14995 579 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 PDK2Q15119 407 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 IRAK1BP1Q5VVH5 260 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 PPP4R4Q6NUP7 873 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ZBTB49Q6ZSB9 765 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 PACRGLQ8N7B6 248 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ZSCAN18Q8TBC5 510 aaPredicted RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 TFAP2CQ92754 450 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 PBXIP1Q96AQ6 731 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 PEBP4Q96S96 227 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ACO2Q99798 780 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 MSTO1Q9BUK6 570 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 WDR55Q9H6Y2 383 aaPredicted RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 RAVER2Q9HCJ3 691 aaKnown RBP15.16■□□□□ 0.02
UBAP1-202ENST00000359544 ERGIC3Q9Y282 383 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 RAP2CQ9Y3L5 183 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 RIPK3Q9Y572 518 aa15.16■□□□□ 0.02
UBAP1-202ENST00000359544 C9IYK1 514 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 SLCO1B7G3V0H7 640 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 STX16-NPEPL1H3BU86 382 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 PLA2G6O60733 806 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 ADORA2AP29274 412 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 EGFLAMQ63HQ2 1017 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 CASC4Q6P4E1 433 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 EEPD1Q7L9B9 569 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 HERC6Q8IVU3 1022 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 ANKFN1Q8N957 763 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 SLC29A1Q99808 456 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 CIB1Q99828 191 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 UNKQ9C0B0 810 aaKnown RBP15.15■□□□□ 0.02
UBAP1-202ENST00000359544 DRC3Q9H069 523 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 POLR3FQ9H1D9 316 aaPredicted RBP15.15■□□□□ 0.02
UBAP1-202ENST00000359544 ARMC7Q9H6L4 198 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 VTI1BQ9UEU0 232 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 SEPT3Q9UH03 358 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 CDYLQ9Y232 598 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 A0A1W2PPW3 197 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 WDR27A2RRH5 827 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 TRIM64A6NGJ6 449 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 TRIM64BA6NI03 449 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 GCATO75600 419 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 ATG7O95352 703 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 PIGRP01833 764 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 EIF2S1P05198 315 aaKnown RBP15.15■□□□□ 0.02
UBAP1-202ENST00000359544 MLNP12872 115 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 CD1EP15812 388 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 CYP2B6P20813 491 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 MYF6P23409 242 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 PRAMEP78395 509 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 MRPS9P82933 396 aaKnown RBP15.15■□□□□ 0.02
UBAP1-202ENST00000359544 ITGA7Q13683 1181 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 STILQ15468 1287 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 PPM1JQ5JR12 505 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 AARS2Q5JTZ9 985 aaKnown RBP15.15■□□□□ 0.02
UBAP1-202ENST00000359544 XKR5Q6UX68 686 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 NAPRTQ6XQN6 538 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 TRIM50Q86XT4 487 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 SIX6OS1Q8N1H7 587 aa15.15■□□□□ 0.02
UBAP1-202ENST00000359544 PGBD4Q96DM1 585 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms