RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DLDP09622 509 aaKnown RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 ELNP15502 786 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 GLUD2P49448 558 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 CDK7P50613 346 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 TBL3Q12788 808 aaKnown RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 PEX6Q13608 980 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 GRM3Q14832 879 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 PCID2Q5JVF3 399 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 GDF6Q6KF10 455 aaPredicted RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 RIPOR1Q6ZS17 1223 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 ATP6V0D2Q8N8Y2 350 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 KHSRPQ92945 711 aaKnown RBP eCLIP11.37□□□□□ -0.59
SSU72-202ENST00000359060 TRPV6Q9H1D0 765 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 ZCCHC18P0CG32 403 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 IRF1P10914 325 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 SLC2A3P11169 496 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 PGGT1BP53609 377 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 SLC5A3P53794 718 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 IZUMO2Q6UXV1 221 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 SNX32Q86XE0 403 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 PIP4K2CQ8TBX8 421 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 USP13Q92995 863 aaPredicted RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 SERPINB11Q96P15 392 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 PTPN18Q99952 460 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 GBA3Q9H227 469 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 MIOSQ9NXC5 875 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 MTMR10Q9NXD2 777 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 IGSF9Q9P2J2 1179 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 TK2O00142 265 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 PIRTP0C851 137 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 GRIA4P48058 902 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 RENBPP51606 427 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 SREBF2Q12772 1141 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 ZBTB6Q15916 424 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 INTS6LQ5JSJ4 861 aaKnown RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 DCLRE1AQ6PJP8 1040 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 ULK2Q8IYT8 1036 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 LZTR1Q8N653 840 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 ATAD1Q8NBU5 361 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 SLC7A6OSQ96CW6 309 aaPredicted RBP11.37□□□□□ -0.59
SSU72-202ENST00000359060 SLC9A7Q96T83 725 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 RBBP8Q99708 897 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 SLC27A5Q9Y2P5 690 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 CRYL1Q9Y2S2 319 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 CALRP27797 417 aaKnown RBP11.36□□□□□ -0.59
SSU72-202ENST00000359060 SOX11P35716 441 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 CD86P42081 329 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 RAP1GAP2Q684P5 730 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 GSTCDQ8NEC7 633 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 NCKIPSDQ9NZQ3 722 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 FLRT1Q9NZU1 646 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 XPR1Q9UBH6 696 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 PLA2G4CQ9UP65 541 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 A0A1W2PQH9 124 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 CCL22O00626 93 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 PFDN6O15212 129 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 PEX11AO75192 247 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 LIMK2P53671 638 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 MCCD1P59942 119 aaPredicted RBP11.36□□□□□ -0.59
SSU72-202ENST00000359060 MPP1Q00013 466 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 IRF9Q00978 393 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 ZBTB17Q13105 803 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 PDAP1Q13442 181 aaKnown RBP11.36□□□□□ -0.59
SSU72-202ENST00000359060 ZNF460Q14592 562 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 AGAP9Q5VTM2 703 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 ESRP1Q6NXG1 681 aaKnown RBP11.36□□□□□ -0.59
SSU72-202ENST00000359060 FAM117BQ6P1L5 589 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 DENND6AQ8IWF6 608 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 LINC01465Q8N7H1 131 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.593e-8■□□□□ 8.4
SSU72-202ENST00000359060 TSPAN17Q96FV3 270 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 TEKT5Q96M29 485 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 SGIP1Q9BQI5 828 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 GLOD4Q9HC38 313 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 SLC45A1Q9Y2W3 748 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 MYADML2A6NDP7 307 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 TPBGLP0DKB5 382 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 THRAP10827 490 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 MPSTP25325 297 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 OR1E1P30953 314 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 CHRNA4P43681 627 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 ACSBG2Q5FVE4 666 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 UBXN11Q5T124 520 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 RGMBQ6NW40 437 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 PCSK9Q8NBP7 692 aaKnown RBP11.36□□□□□ -0.59
SSU72-202ENST00000359060 GIPC2Q8TF65 315 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 TSPAN18Q96SJ8 248 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 COG4Q9H9E3 785 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 ADAM28Q9UKQ2 775 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 FBXO5Q9UKT4 447 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 PCDHB5Q9Y5E4 795 aa11.36□□□□□ -0.59
SSU72-202ENST00000359060 SCAMP3O14828 347 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 RAMP2O60895 175 aa11.35□□□□□ -0.59
SSU72-202ENST00000359060 ALDOAP04075 364 aaKnown RBP11.35□□□□□ -0.59
SSU72-202ENST00000359060 IGFBP6P24592 240 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms