RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ATP1A4Q13733 1029 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 NCBP2-AS2Q69YL0 99 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 OTOP3Q7RTS5 596 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 DPP9Q86TI2 863 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SETD3Q86TU7 594 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 PSTKQ8IV42 348 aaKnown RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 DENND6AQ8IWF6 608 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 FAM47BQ8NA70 645 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SPATA22Q8NHS9 363 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 DDI1Q8WTU0 396 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 FCRL3Q96P31 734 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 GPR20Q99678 358 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CCDC90BQ9GZT6 254 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 COQ10BQ9H8M1 238 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CACNG4Q9UBN1 327 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 STK39Q9UEW8 545 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ZDHHC2Q9UIJ5 367 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 RAP2CQ9Y3L5 183 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 PDE4DIPQ5VU43 2346 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 HEATR9A2RTY3 570 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MAGEB3O15480 346 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 BUD23O43709 281 aaKnown RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MPOP05164 745 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CD1EP15812 388 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CDH13P55290 713 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CCNA1P78396 465 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 YWHAHQ04917 246 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MBTD1Q05BQ5 628 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 FOXD4Q12950 439 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 STX5Q13190 355 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SEMA5AQ13591 1074 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ADGRE1Q14246 886 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 FBXO48Q5FWF7 155 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ACBD5Q5T8D3 534 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 GRAMD4Q6IC98 578 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF280DQ6N043 979 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 OLFML1Q6UWY5 402 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 GPR141Q7Z602 305 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 HSPBAP1Q96EW2 488 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ZFRQ96KR1 1074 aaKnown RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 GMLQ99445 158 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SEPHS2Q99611 448 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 RBBP8Q99708 897 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ING2Q9H160 280 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ADNPQ9H2P0 1102 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 PDZD7Q9H5P4 517 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CDHR5Q9HBB8 845 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SETD4Q9NVD3 440 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 NCKIPSDQ9NZQ3 722 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 DSEQ9UL01 958 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 PCDHGB4Q9UN71 923 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 DOLKQ9UPQ8 538 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 PCDHGB5Q9Y5G0 923 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 UBA6A0AVT1 1052 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 CCL22O00626 93 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ANGPT2O15123 496 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 GMNNO75496 209 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TRMUO75648 421 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 IQCF3P0C7M6 154 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ARSAP15289 507 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 HOXD11P31277 338 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 NR1H2P55055 460 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MTTPP55157 894 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 LSAMPQ13449 338 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MYLK3Q32MK0 819 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 FBXO47Q5MNV8 452 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TBCELQ5QJ74 424 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 OTUD3Q5T2D3 398 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF618Q5T7W0 954 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 LIPMQ5VYY2 423 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MAVSQ7Z434 540 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 FSTL5Q8N475 847 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TTC39CQ8N584 583 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 PPHLN1Q8NEY8 458 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 RP9Q8TA86 221 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TMEM174Q8WUU8 243 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 LPGAT1Q92604 370 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 EMID1Q96A84 441 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 VPS50Q96JG6 964 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TNIP3Q96KP6 325 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 CCDC138Q96M89 665 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 SORT1Q99523 831 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MRPS26Q9BYN8 205 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 BCO2Q9BYV7 579 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 WDCPQ9H6R7 721 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 DNAJB4Q9UDY4 337 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MYRFQ9Y2G1 1151 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 PPME1Q9Y570 386 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 FAM95CA0A1B0GW59 222 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MDM4O15151 490 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 GAS2O43903 313 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ATG7O95352 703 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MT-CYBP00156 380 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ASLP04424 464 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ATP5BP06576 529 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 USP17L7P0C7H9 530 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 PABPC4LP0CB38 370 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 GFAPP14136 432 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 IL10P22301 178 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms