RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SIN3BO75182 1162 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 GRIA4P48058 902 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 FAM187BQ17R55 369 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 DDI2Q5TDH0 399 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MFSD7Q6UXD7 560 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MXRA8Q9BRK3 442 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 TDRKHQ9Y2W6 561 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 TTC3P53804 2025 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 GABRB2P47870 512 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF549Q6P9A3 640 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 KLHDC10Q6PID8 442 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 DNAJC14Q6Y2X3 702 aaPredicted RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 PGBD3Q8N328 593 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 LPAR1Q92633 364 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 SP140LQ9H930 580 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 CISHQ9NSE2 258 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 TBC1D13Q9NVG8 400 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 CRLS1Q9UJA2 301 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 LMO7Q8WWI1 1683 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 SYNCRIPO60506 623 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 H6PDO95479 791 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 SERPINA1P01009 418 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 TCF4P15884 667 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 RALGDSQ12967 914 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 HS6ST3Q8IZP7 471 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 MRPL57Q9BQC6 102 aaKnown RBP8.89□□□□□ -0.99
COL6A6-201ENST00000358511 SNX7Q9UNH6 387 aa8.89□□□□□ -0.99
COL6A6-201ENST00000358511 NUP205Q92621 2012 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CYP27B1O15528 508 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CYP1A2P05177 515 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 MGAT1P26572 445 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PNPLA4P41247 253 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SCRN3Q0VDG4 424 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CBFBQ13951 182 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 HERC6Q8IVU3 1022 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 B3GALNT2Q8NCR0 500 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TAS1R2Q8TE23 839 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 EBF3Q9H4W6 596 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PRMT7Q9NVM4 692 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 DDIT4Q9NX09 232 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SPEF1Q9Y4P9 236 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 FADS3Q9Y5Q0 445 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PRR5-ARHGAP8B1AHC4 643 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 M0QYT0 321 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 LIASO43766 372 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ARHGAP8P85298 464 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 FNBP1LQ5T0N5 605 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TMCO6Q96DC7 493 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CGRRF1Q99675 332 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SENP6Q9GZR1 1112 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 MIEF1Q9NQG6 463 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SMPD3Q9NY59 655 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PLK2Q9NYY3 685 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF224Q9NZL3 707 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TMEM216Q9P0N5 145 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 LNPEPQ9UIQ6 1025 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CORO2BQ9UQ03 480 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 DCDC2CA8MYV0 355 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ITGB3P05106 788 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ZBTB46Q86UZ6 589 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF671Q8TAW3 534 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RBM4BQ9BQ04 359 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PDCD10Q9BUL8 212 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RBM4Q9BWF3 364 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RBAK-RBAKDNI3L0D1 243 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CCNT2O60583 730 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 CCNB1P14635 433 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RASA1P20936 1047 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 NOS3P29474 1203 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PHC1P78364 1004 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SCN1BQ07699 218 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ARHGEF7Q14155 803 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 HERC3Q15034 1050 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SLC9A4Q6AI14 798 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PIWIL4Q7Z3Z4 852 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 NECAB2Q7Z6G3 386 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PROSER1Q86XN7 944 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RCN3Q96D15 328 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 GNPTGQ9UJJ9 305 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RAP2CQ9Y3L5 183 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 ENO2P09104 434 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SREBF1P36956 1147 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 USP4Q13107 963 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RBM12BQ8IXT5 1001 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 RASGEF1CQ8N431 466 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SLC35C1Q96A29 364 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TLCD1Q96CP7 247 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 POP1Q99575 1024 aaKnown RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 PLLPQ9Y342 182 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 COL3A1P02461 1466 aaPredicted RBP8.88□□□□□ -0.99
COL6A6-201ENST00000358511 F9P00740 461 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SLC2A4P14672 509 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 GSTM5P46439 218 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 SEPHS1P49903 392 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TMEM119Q4V9L6 283 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 UBE2Q1Q7Z7E8 422 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 DSELQ8IZU8 1212 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TBC1D16Q8TBP0 767 aa8.88□□□□□ -0.99
COL6A6-201ENST00000358511 TP53INP1Q96A56 240 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms