RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SIX5Q8N196 739 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 USP33Q8TEY7 942 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 NKD2Q969F2 451 aaPredicted RBP25.89■■□□□ 1.74
SSBP3-202ENST00000357475 MAGOHBQ96A72 148 aaKnown RBP25.89■■□□□ 1.74
SSBP3-202ENST00000357475 MYO19Q96H55 970 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 USP29Q9HBJ7 922 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 SLCO3A1Q9UIG8 710 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 NDRG2Q9UN36 371 aaKnown RBP25.89■■□□□ 1.74
SSBP3-202ENST00000357475 ERVW-1Q9UQF0 538 aa25.89■■□□□ 1.74
SSBP3-202ENST00000357475 PHF2O75151 1096 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 CCNCP24863 283 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 ECT2LQ008S8 904 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 SLC10A7Q0GE19 358 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 ZBTB17Q13105 803 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 PRUNE1Q86TP1 453 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 C12orf50Q8NA57 414 aaPredicted RBP25.88■■□□□ 1.73
SSBP3-202ENST00000357475 SPATA4Q8NEY3 305 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 ACDQ96AP0 544 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 SEPT10Q9P0V9 454 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 MTF2Q9Y483 593 aaPredicted RBP25.88■■□□□ 1.73
SSBP3-202ENST00000357475 HACD1B0YJ81 288 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 EGFLAMQ63HQ2 1017 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF572Q7Z3I7 529 aaPredicted RBP25.88■■□□□ 1.73
SSBP3-202ENST00000357475 KLHL7Q8IXQ5 586 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF687Q8N1G0 1237 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 MAML1Q92585 1016 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 ACOX2Q99424 681 aa25.88■■□□□ 1.73
SSBP3-202ENST00000357475 UBA2Q9UBT2 640 aaPredicted RBP25.88■■□□□ 1.73
SSBP3-202ENST00000357475 FCF1Q9Y324 198 aaKnown RBP25.88■■□□□ 1.73
SSBP3-202ENST00000357475 MATN3O15232 486 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 COILP38432 576 aaPredicted RBP25.87■■□□□ 1.73
SSBP3-202ENST00000357475 ZXDAP98168 799 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 WASHC5Q12768 1159 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 GRSF1Q12849 480 aaKnown RBP eCLIP25.87■■□□□ 1.73
SSBP3-202ENST00000357475 CYTH1Q15438 398 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 LRRC49Q8IUZ0 686 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 CDKL3Q8IVW4 592 aaPredicted RBP25.87■■□□□ 1.73
SSBP3-202ENST00000357475 FAM71DQ8N9W8 422 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 MSANTD3Q96H12 275 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 FRMD8P1Q9BZ68 369 aaPredicted RBP25.87■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF148Q9UQR1 794 aa25.87■■□□□ 1.73
SSBP3-202ENST00000357475 GOLGA6L10A0A0M3HER8 536 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 BCLAF3A2AJT9 711 aaKnown RBP25.86■■□□□ 1.73
SSBP3-202ENST00000357475 KCNN4O15554 427 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 DLDP09622 509 aaKnown RBP25.86■■□□□ 1.73
SSBP3-202ENST00000357475 SRCP12931 536 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 KIR2DL1P43626 348 aaPredicted RBP25.86■■□□□ 1.73
SSBP3-202ENST00000357475 SERPINH1P50454 418 aaKnown RBP25.86■■□□□ 1.73
SSBP3-202ENST00000357475 PRKCQQ04759 706 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 EIF4HQ15056 248 aaKnown RBP25.86■■□□□ 1.73
SSBP3-202ENST00000357475 RETSATQ6NUM9 610 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 DRICH1Q6PGQ1 229 aaPredicted RBP25.86■■□□□ 1.73
SSBP3-202ENST00000357475 SUGP1Q8IWZ8 645 aaKnown RBP25.86■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF366Q8N895 744 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 GLIS1Q8NBF1 620 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 LRRN4CLQ8ND94 238 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 HTR3CQ8WXA8 447 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 FOXQ1Q9C009 403 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 MTG2Q9H4K7 406 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 HS3ST2Q9Y278 367 aa25.86■■□□□ 1.73
SSBP3-202ENST00000357475 MUSKO15146 869 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 TMCC1O94876 653 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 CCNB1P14635 433 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 ETS1P14921 441 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 PTPN3P26045 913 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 TARSP26639 723 aaKnown RBP25.85■■□□□ 1.73
SSBP3-202ENST00000357475 TNFRSF4P43489 277 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 STARD6P59095 220 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 MRPS25P82663 173 aaKnown RBP25.85■■□□□ 1.73
SSBP3-202ENST00000357475 CKAP4Q07065 602 aaKnown RBP25.85■■□□□ 1.73
SSBP3-202ENST00000357475 TUBB2AQ13885 445 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 CCINQ13939 588 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF234Q14588 700 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 PREPLQ4J6C6 727 aaPredicted RBP25.85■■□□□ 1.73
SSBP3-202ENST00000357475 HEATR6Q6AI08 1181 aaKnown RBP25.85■■□□□ 1.73
SSBP3-202ENST00000357475 TIGD7Q6NT04 549 aaPredicted RBP25.85■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF852Q6ZMS4 543 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 PGBD5Q8N414 524 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 SH2D3CQ8N5H7 860 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 ATP11CQ8NB49 1132 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 TUBB2BQ9BVA1 445 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 CARD6Q9BX69 1037 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 BRD8Q9H0E9 1235 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 L2HGDHQ9H9P8 463 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 SLC25A13Q9UJS0 675 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 STARD13Q9Y3M8 1113 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 BDP1A6H8Y1 2624 aa25.85■■□□□ 1.73
SSBP3-202ENST00000357475 WASH3PC4AMC7 463 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 RNF103O00237 685 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 MAN2B1O00754 1011 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF821O75541 412 aaPredicted RBP25.84■■□□□ 1.73
SSBP3-202ENST00000357475 GJB3O75712 270 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 JCHAINP01591 159 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 ATP5BP06576 529 aaKnown RBP25.84■■□□□ 1.73
SSBP3-202ENST00000357475 ITGAVP06756 1048 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 DRD1P21728 446 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 TIE1P35590 1138 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 SULT2A1Q06520 285 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF33AQ06730 810 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 LBRQ14739 615 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms