RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SRCP12931 536 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 SERPINB6P35237 376 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 CXCL12P48061 93 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 PXNP49023 591 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 RPS6KA1Q15418 735 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 CRY1Q16526 586 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 EOGTQ5NDL2 527 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 RETSATQ6NUM9 610 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 C1orf210Q8IVY1 113 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 SLC35F6Q8N357 371 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 SH2D3CQ8N5H7 860 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 HAUS1Q96CS2 278 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 TLR10Q9BXR5 811 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 DTLQ9NZJ0 730 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 FCF1Q9Y324 198 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 MUC22E2RYF6 1773 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 BNIP3LO60238 219 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 KIF5CO60282 957 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 DLG2Q15700 870 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 HSF5Q4G112 596 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 B4GALNT4Q76KP1 1039 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 MAML2Q8IZL2 1156 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 OSBPL8Q9BZF1 889 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 SLC6A17Q9H1V8 727 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 IPO11Q9UI26 975 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 SLC8A2Q9UPR5 921 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 HS3ST2Q9Y278 367 aa18.25■□□□□ 0.51
PDLIM7-202ENST00000355841 NPC1O15118 1278 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 NNMTP40261 264 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 SERPINH1P50454 418 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 CCR3P51677 355 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 FAM182AQ5T1J6 154 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 Q6ZVU0 165 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 CACUL1Q86Y37 369 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 FRS2Q8WU20 508 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 TNKS2Q9H2K2 1166 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 CACNA1IQ9P0X4 2223 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 CHD5Q8TDI0 1954 aa18.24■□□□□ 0.51
PDLIM7-202ENST00000355841 TCRBV21S2A2A0A5A6 115 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 LAMTOR5O43504 91 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 SYNCRIPO60506 623 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 PRAMEF11O60813 436 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 PECAM1P16284 738 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 CXCR5P32302 372 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 GALNT2Q10471 571 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 TFDP2Q14188 446 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 PPP2R5EQ16537 467 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 HNRNPA1L2Q32P51 320 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 ATPAF2Q8N5M1 289 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 PTPRN2Q92932 1015 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 IER2Q9BTL4 223 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 SP110Q9HB58 689 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 PDFQ9HBH1 243 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 CD248Q9HCU0 757 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 PRSS16Q9NQE7 514 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 NYNRINQ9P2P1 1898 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 KMT2EQ8IZD2 1858 aa18.23■□□□□ 0.51
PDLIM7-202ENST00000355841 K7ESF4 209 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 KCNK3O14649 394 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 ATP9BO43861 1147 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 MAFKO60675 156 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 SIN3BO75182 1162 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 ZNF821O75541 412 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 COPS2P61201 443 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 CSTF1Q05048 431 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 DMWDQ09019 674 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 STARD3Q14849 445 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 C9orf64Q5T6V5 341 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 HEATR6Q6AI08 1181 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 ANO7Q6IWH7 933 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 TSTD1Q8NFU3 115 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 HMGB4Q8WW32 186 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 LGMNQ99538 433 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 FAM118BQ9BPY3 351 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 TM6SF2Q9BZW4 377 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 TCRBV7S2A1N4TA0A589 114 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 GOLGA6L9A6NEM1 432 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 TMCC1O94876 653 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 ZFXP17010 805 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 GARSP41250 739 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 DGKEP52429 567 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 GNG11P61952 73 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 E2F5Q15329 346 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 C22orf39Q6P5X5 142 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 MAMSTRQ6ZN01 415 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 KDM1BQ8NB78 822 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 CCNYQ8ND76 341 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 TRIM44Q96DX7 344 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 MKRN2Q9H000 416 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 PRMT8Q9NR22 394 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 UBA2Q9UBT2 640 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 JRKLQ9Y4A0 524 aa18.22■□□□□ 0.51
PDLIM7-202ENST00000355841 PTPN7P35236 360 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 CETN2P41208 172 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 IL10RBQ08334 325 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 SLC20A2Q08357 652 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 CAMK2GQ13555 558 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 CCDC181Q5TID7 509 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms