RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ARHGAP20Q9P2F6 1191 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 NCKAP1Q9Y2A7 1128 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 CA5BQ9Y2D0 317 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 DAAM1Q9Y4D1 1078 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 CHD8Q9HCK8 2581 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 TRPM6Q9BX84 2022 aa17.13■□□□□ 0.33
PDLIM7-201ENST00000355572 KMT2BQ9UMN6 2715 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 FRYQ5TBA9 3013 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 MCF2LO15068 1137 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 ATMINO43313 823 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 LRIG2O94898 1065 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 KRT3P12035 628 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 GPD1P21695 349 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 OR1E1P30953 314 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 SDC4P31431 198 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 CTSKP43235 329 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 NSFP46459 744 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 GRIA4P48058 902 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 OXCT1P55809 520 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 MTA1Q13330 715 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 PIP5KL1Q5T9C9 394 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 C22orf39Q6P5X5 142 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 LRRC31Q6UY01 552 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 LEKR1Q6ZMV7 388 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 MCOLN2Q8IZK6 566 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 NETO2Q8NC67 525 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 C3orf20Q8ND61 904 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 OR8D1Q8WZ84 308 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 SCNM1Q9BWG6 230 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 TTYH3Q9C0H2 523 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 KLC2Q9H0B6 622 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 NOL6Q9H6R4 1146 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 KLK13Q9UKR3 277 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 PCOLCE2Q9UKZ9 415 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 AKAP13Q12802 2813 aa17.12■□□□□ 0.33
PDLIM7-201ENST00000355572 ILVBLA1L0T0 632 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 SIGLEC16A6NMB1 481 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 PLRG1O43660 514 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 KRT37O76014 449 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 MAT2AP31153 395 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 GKP32189 559 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 NNMTP40261 264 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 ZNF165P49910 485 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 AFF3P51826 1226 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 NRG1Q02297 640 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 GNA12Q03113 381 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 DBX2Q6ZNG2 339 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 SLCO6A1Q86UG4 719 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 ARFGAP1Q8N6T3 406 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 MCEEQ96PE7 176 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 SPON2Q9BUD6 331 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 SELENOOQ9BVL4 669 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 ZDHHC5Q9C0B5 715 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 SLC32A1Q9H598 525 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 TOR4AQ9NXH8 423 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 PPARGC1AQ9UBK2 798 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 OR12D3Q9UGF7 316 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 DNAI1Q9UI46 699 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 WASF2Q9Y6W5 498 aa17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 ARID1BQ8NFD5 2236 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-201ENST00000355572 A0A1B0GTH6 734 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 SYCE3A1L190 88 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 CBX4O00257 560 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 LATO43561 262 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 CHRNA3P32297 505 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 CCR5P51681 352 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 SLC14A1Q13336 389 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 ZNF423Q2M1K9 1284 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 ACAD10Q6JQN1 1059 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 DPY19L3Q6ZPD9 716 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 ZNF571Q7Z3V5 609 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 CHCHD4Q8N4Q1 142 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 KLK6Q92876 244 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 ARHGEF2Q92974 986 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 C2orf49Q9BVC5 232 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 ACE2Q9BYF1 805 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 ATP13A1Q9HD20 1204 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 GPATCH2LQ9NWQ4 482 aa17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 COL5A1P20908 1838 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3DA0A087WVF3 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3IA0A087WXS9 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3EA0A087X179 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3KA0A087X1G2 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3FA6NER0 549 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 LRRC72A6NJI9 287 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3LB9A6J9 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 CER1O95813 267 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 CALB1P05937 261 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 PLEKP08567 350 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 TBC1D3HP0C7X1 549 aa17.09■□□□□ 0.33
PDLIM7-201ENST00000355572 ZNF883P0CG24 379 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms