RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 IFT88Q13099 833 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 OLIG2Q13516 323 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 LRRC26Q2I0M4 334 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ANO4Q32M45 955 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ANKRD20A4Q4UJ75 823 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 LACTB2Q53H82 288 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CERCAMQ5T4B2 595 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 HHATQ5VTY9 493 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 FBXO46Q6PJ61 603 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 LVRNQ6Q4G3 990 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 KDELC1Q6UW63 502 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 RANBP10Q6VN20 620 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CDHR3Q6ZTQ4 885 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 DDX53Q86TM3 631 aaKnown RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 UNC5BQ8IZJ1 945 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ACMSDQ8TDX5 336 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 USP33Q8TEY7 942 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CCT6BQ92526 530 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF75CPQ92670 426 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CDKL2Q92772 493 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 TRIM43Q96BQ3 446 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 MYEOVQ96EZ4 313 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 HMCESQ96FZ2 354 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CERS2Q96G23 380 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 TRMT2BQ96GJ1 504 aaKnown RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 CABS1Q96KC9 395 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 KLF6Q99612 283 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 IL22Q9GZX6 179 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 SLC25A51Q9H1U9 297 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 C11orf49Q9H6J7 331 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ARNT2Q9HBZ2 717 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 MRM3Q9HC36 420 aaKnown RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ATP13A1Q9HD20 1204 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 RBM22Q9NW64 420 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 PIH1D1Q9NWS0 290 aaKnown RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 SAMD15Q9P1V8 674 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 DNMT3LQ9UJW3 386 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 MAFFQ9ULX9 164 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 PLLPQ9Y342 182 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 STARD13Q9Y3M8 1113 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 USP15Q9Y4E8 981 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 MRPL42Q9Y6G3 142 aaKnown RBP7.05□□□□□ -1.28
TRIM55-203ENST00000350034 RPS6KL1Q9Y6S9 549 aa7.05□□□□□ -1.28
TRIM55-203ENST00000350034 GOLGA6L7A0A1B0GV03 622 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 H3BNC9 293 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 GOLGA8RI6L899 631 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 HAX1O00165 279 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 KLF11O14901 512 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 COCHO43405 550 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 ACSL4O60488 711 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 LPXNO60711 386 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 SIN3BO75182 1162 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 BAIAP3O94812 1187 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 LINC00271P0C7V0 271 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 TACR2P21452 398 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 CRHR1P34998 444 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 ATP5C1P36542 298 aaKnown RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 GP5P40197 560 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PPP3CCP48454 512 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 CSRP3P50461 194 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 RENBPP51606 427 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 KCNQ1P51787 676 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 WDR5P61964 334 aaKnown RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 IL10RBQ08334 325 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 MPP3Q13368 585 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 MSLNQ13421 630 aaPredicted RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 SERINC3Q13530 473 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 BMPR2Q13873 1038 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 DBN1Q16643 649 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PARP15Q460N3 678 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 FAM133BQ5BKY9 247 aaKnown RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PCID2Q5JVF3 399 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 HECTD3Q5T447 861 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 STXBP5Q5T5C0 1151 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 TEDDM1Q5T9Z0 273 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 GRTP1Q5TC63 336 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 RAP1GAP2Q684P5 730 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 RNF43Q68DV7 783 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 KIAA1841Q6NSI8 718 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 CASC4Q6P4E1 433 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PKN3Q6P5Z2 889 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 SPATA21Q7Z572 469 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 TAX1BP1Q86VP1 789 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 MIB1Q86YT6 1006 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 TCEAL8Q8IYN2 117 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 SPATA22Q8NHS9 363 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 ARRDC2Q8TBH0 407 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PTCD2Q8WV60 388 aaKnown RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF669Q96BR6 464 aaPredicted RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PLD4Q96BZ4 506 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 IMP4Q96G21 291 aaKnown RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 MRGPRX2Q96LB1 330 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 SRPK1Q96SB4 655 aaKnown RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 CPNE1Q99829 537 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 TBL1YQ9BQ87 522 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 KLF16Q9BXK1 252 aaPredicted RBP7.04□□□□□ -1.28
TRIM55-203ENST00000350034 C12orf65Q9H3J6 166 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms