RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 OSGEPQ9NPF4 335 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 INTUQ9ULD6 942 aa22.58■■□□□ 1.21
SNX3-202ENST00000349379 WDR87Q6ZQQ6 2873 aa22.58■■□□□ 1.2
SNX3-202ENST00000349379 CFAP54Q96N23 3096 aa22.58■■□□□ 1.2
SNX3-202ENST00000349379 MCF2LO15068 1137 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 MTA2O94776 668 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 PROSCO94903 275 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 RARAP10276 462 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 GOT1P17174 413 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 ZNF33AQ06730 810 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 TCEAL1Q15170 157 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 ACCSLQ4AC99 568 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 KCNT1Q5JUK3 1230 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 C22orf39Q6P5X5 142 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 RFX8Q6ZV50 586 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 CYP2U1Q7Z449 544 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 CADM4Q8NFZ8 388 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 FAM131CQ96AQ9 280 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 CEP44Q9C0F1 390 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 DONSONQ9NYP3 566 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 CWC15Q9P013 229 aaKnown RBP22.57■■□□□ 1.2
SNX3-202ENST00000349379 LCMT1Q9UIC8 334 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 CACNA1EQ15878 2313 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 ADAMTS9Q9P2N4 1935 aa22.57■■□□□ 1.2
SNX3-202ENST00000349379 DOCK9Q9BZ29 2069 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 PCDH15Q96QU1 1955 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 MID1O15344 667 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 KDELR3O43731 214 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 NDUFS2O75306 463 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 C5AR1P21730 350 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 SLC8A1P32418 973 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 DPYSQ14117 519 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 SMTNL2Q2TAL5 461 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 PARP15Q460N3 678 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 PPP6R3Q5H9R7 873 aaPredicted RBP22.56■■□□□ 1.2
SNX3-202ENST00000349379 LYSMD4Q5XG99 296 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 PRR23CQ6ZRP0 262 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 ARMCX6Q7L4S7 300 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 KIAA2013Q8IYS2 634 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 OR2A12Q8NGT7 310 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 FAM71BQ8TC56 605 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 OR8D1Q8WZ84 308 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 GPR174Q9BXC1 333 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 PCED1AQ9H1Q7 454 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 LRRC19Q9H756 370 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 VPS45Q9NRW7 570 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 SERGEFQ9UGK8 458 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 PPM1HQ9ULR3 514 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 SHROOM3Q8TF72 1996 aa22.56■■□□□ 1.2
SNX3-202ENST00000349379 ANKRD36A6QL64 1941 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 C10orf142B7Z368 130 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 RASA4BC9J798 803 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 RASA4O43374 803 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 ADH1BP00325 375 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 ERCC2P18074 760 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 CDC25BP30305 580 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 ACSL1P33121 698 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 MAN1A1P33908 653 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 DPP6P42658 865 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 NDST2P52849 883 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 GEMIN4P57678 1058 aaKnown RBP22.55■■□□□ 1.2
SNX3-202ENST00000349379 CCDC6Q16204 474 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 AFMIDQ63HM1 303 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 POLNQ7Z5Q5 900 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 CPNE8Q86YQ8 564 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 CCDC170Q8IYT3 715 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 AADATQ8N5Z0 425 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 DEFB119Q8N690 84 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 PCDH20Q8N6Y1 951 aaKnown RBP22.55■■□□□ 1.2
SNX3-202ENST00000349379 SLC35G2Q8TBE7 412 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 RFFLQ8WZ73 363 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 TSC1Q92574 1164 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 FOXJ1Q92949 421 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 ISG20Q96AZ6 181 aaKnown RBP22.55■■□□□ 1.2
SNX3-202ENST00000349379 HMCESQ96FZ2 354 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 HSPA12BQ96MM6 686 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 ZWILCHQ9H900 591 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 SGK2Q9HBY8 427 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.55■■□□□ 1.2
SNX3-202ENST00000349379 TMEM74BQ9NUR3 256 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 FBXL12Q9NXK8 326 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 PILRBQ9UKJ0 227 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 SARDHQ9UL12 918 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 FZD4Q9ULV1 537 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 ACTL7AQ9Y615 435 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 PLXNA2O75051 1894 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 CEP250Q9BV73 2442 aa22.55■■□□□ 1.2
SNX3-202ENST00000349379 TP53BP1Q12888 1972 aaPredicted RBP22.54■■□□□ 1.2
SNX3-202ENST00000349379 A0A1W2PP55 124 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 ZSCAN5CA6NGD5 496 aaPredicted RBP22.54■■□□□ 1.2
SNX3-202ENST00000349379 FOXD2O60548 495 aaPredicted RBP22.54■■□□□ 1.2
SNX3-202ENST00000349379 ITPKAP23677 461 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 HOXD12P35452 270 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 DRD3P35462 400 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 PSMD8P48556 350 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 SERINC3Q13530 473 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 DSG4Q86SJ6 1040 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 FAM124AQ86V42 546 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 SYT12Q8IV01 421 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 RHOT2Q8IXI1 618 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms