RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 INPP1P49441 399 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 MPP2Q14168 576 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 LIN52Q52LA3 116 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 ARPINQ7Z6K5 226 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 CLVS1Q8IUQ0 354 aaPredicted RBP14.97□□□□□ -0.01
NUP50-201ENST00000347635 BLOC1S5Q8TDH9 187 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 SNX19Q92543 992 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 RCN3Q96D15 328 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 PRKD2Q9BZL6 878 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 DDX43Q9NXZ2 648 aaKnown RBP14.97□□□□□ -0.01
NUP50-201ENST00000347635 COPG2Q9UBF2 871 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 DERAQ9Y315 318 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 TRIM38O00635 465 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 FESP07332 822 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 MMP3P08254 477 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 AKAP5P24588 427 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 NOS2P35228 1153 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 POU4F1Q01851 419 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 PRAMEF19Q5SWL8 479 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 PPP1R26Q5T8A7 1209 aaPredicted RBP14.97□□□□□ -0.01
NUP50-201ENST00000347635 LIPMQ5VYY2 423 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 PTAR1Q7Z6K3 402 aaPredicted RBP14.97□□□□□ -0.01
NUP50-201ENST00000347635 PQLC1Q8N2U9 271 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 TSPAN14Q8NG11 270 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 ADAM7Q9H2U9 754 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 PRKAG3Q9UGI9 489 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 EPHA3P29320 983 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 SLC5A9Q2M3M2 681 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 ANO7Q6IWH7 933 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 CMC1Q7Z7K0 106 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 SLC41A1Q8IVJ1 513 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 EDEM1Q92611 657 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 ADAM2Q99965 735 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 ACE2Q9BYF1 805 aaPredicted RBP14.97□□□□□ -0.01
NUP50-201ENST00000347635 ELOVL4Q9GZR5 314 aa14.97□□□□□ -0.01
NUP50-201ENST00000347635 M0R3G1 203 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 CLASP2O75122 1294 aaKnown RBP14.96□□□□□ -0.01
NUP50-201ENST00000347635 CDH2P19022 906 aaPredicted RBP14.96□□□□□ -0.01
NUP50-201ENST00000347635 WNT8BQ93098 351 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 RBBP8Q99708 897 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 SLC4A5Q9BY07 1137 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 OLA1Q9NTK5 396 aaKnown RBP14.96□□□□□ -0.01
NUP50-201ENST00000347635 PSMD13Q9UNM6 376 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 MAFBQ9Y5Q3 323 aaPredicted RBP14.96□□□□□ -0.01
NUP50-201ENST00000347635 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
NUP50-201ENST00000347635 PSMD12O00232 456 aaPredicted RBP14.96□□□□□ -0.01
NUP50-201ENST00000347635 MLNP12872 115 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 CCDC92Q53HC0 331 aaPredicted RBP14.96□□□□□ -0.01
NUP50-201ENST00000347635 RHBDF2Q6PJF5 856 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 SIAH1Q8IUQ4 282 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 TMEM199Q8N511 208 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 NDNQ99608 321 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 RBM22Q9NW64 420 aaKnown RBP eCLIP14.96□□□□□ -0.01
NUP50-201ENST00000347635 RECQL4O94761 1208 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 YBX3P16989 372 aaKnown RBP eCLIP14.96□□□□□ -0.012e-6■■□□□ 12.4
NUP50-201ENST00000347635 DEFB128Q7Z7B8 93 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 PLD3Q8IV08 490 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 DCUN1D1Q96GG9 259 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 PRDM12Q9H4Q4 367 aa14.96□□□□□ -0.01
NUP50-201ENST00000347635 EFCAB14O75071 495 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 PGK1P00558 417 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 RPL9P32969 192 aaKnown RBP14.96□□□□□ -0.02
NUP50-201ENST00000347635 PSME3P61289 254 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 CREMQ03060 361 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 KLF10Q13118 480 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 MSLNQ13421 630 aaPredicted RBP14.96□□□□□ -0.02
NUP50-201ENST00000347635 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 LCLAT1Q6UWP7 414 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 TMCO5AQ8N6Q1 288 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 LENG1Q96BZ8 264 aaPredicted RBP14.96□□□□□ -0.02
NUP50-201ENST00000347635 DGCR14Q96DF8 476 aaKnown RBP14.96□□□□□ -0.02
NUP50-201ENST00000347635 SMARCD1Q96GM5 515 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 ENTPD7Q9NQZ7 604 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 ZNF214Q9UL59 606 aaPredicted RBP14.96□□□□□ -0.02
NUP50-201ENST00000347635 NDUFAF1Q9Y375 327 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 LRRC42Q9Y546 428 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 NR2E3Q9Y5X4 410 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 NAV1Q8NEY1 1877 aa14.96□□□□□ -0.02
NUP50-201ENST00000347635 TCRBV7S3A2A0A539 114 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 TBX10O75333 385 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 GJB1P08034 283 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 VAV1P15498 845 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 BTG3Q14201 252 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 SQLEQ14534 574 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 C16orf72Q14CZ0 275 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 TRIM16LQ309B1 348 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 HSFY1Q96LI6 401 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 GIT1Q9Y2X7 761 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 COL2A1P02458 1487 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 A0A087WXM4 84 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 CASTOR2A6NHX0 329 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 MAN1A2O60476 641 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 LRPAP1P30533 357 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 GRM5P41594 1212 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 ZNF135P52742 658 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 FRG1Q14331 258 aaKnown RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 PCID2Q5JVF3 399 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 ANKRD52Q8NB46 1076 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 QKIQ96PU8 341 aaKnown RBP eCLIP14.95□□□□□ -0.02
NUP50-201ENST00000347635 DCUN1D5Q9BTE7 237 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms