RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 OSTNP61366 133 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 GNASQ5JWF2 1037 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 GRTP1Q5TC63 336 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 JADE1Q6IE81 842 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 TRIM67Q6ZTA4 783 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 LPCAT2Q7L5N7 544 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 CDR2LQ86X02 465 aaPredicted RBP16.16■□□□□ 0.18
HMGA1-202ENST00000347617 EMC1Q8N766 993 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 CNTD1Q8N815 330 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 C1orf127Q8N9H9 656 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 DNAJB3Q8WWF6 145 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 ZNF597Q96LX8 424 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 LENG8Q96PV6 779 aaPredicted RBP16.16■□□□□ 0.18
HMGA1-202ENST00000347617 CPXM1Q96SM3 734 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 FAM49AQ9H0Q0 323 aaPredicted RBP16.16■□□□□ 0.18
HMGA1-202ENST00000347617 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
HMGA1-202ENST00000347617 PTBP2Q9UKA9 531 aaKnown RBP16.16■□□□□ 0.18
HMGA1-202ENST00000347617 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 H3BSA7 217 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 ZBTB14O43829 449 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 ERBB2P04626 1255 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 MPOP05164 745 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 TTKP33981 857 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 ESRRGP62508 458 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 MRPS22P82650 360 aaKnown RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 MMRN1Q13201 1228 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 TMEM132DQ14C87 1099 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 SNX17Q15036 470 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 PDCD4Q53EL6 469 aaKnown RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 ZNF667Q5HYK9 610 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 UNC5BQ8IZJ1 945 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 TMEM102Q8N9M5 508 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 RDH11Q8TC12 318 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 DUS3LQ96G46 650 aaKnown RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 CAPNS2Q96L46 248 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 PEBP4Q96S96 227 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 COPS7BQ9H9Q2 264 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 EFCAB1Q9HAE3 211 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 RRN3Q9NYV6 651 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 TXNDC16Q9P2K2 825 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 SIX4Q9UIU6 781 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 SLC8A2Q9UPR5 921 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 TRIM38O00635 465 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 MDM4O15151 490 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 HMGCRP04035 888 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 NFICP08651 508 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 PORP16435 677 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 PCSK6P29122 969 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 GP5P40197 560 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 THOP1P52888 689 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 RBP5P82980 135 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 FRG1Q14331 258 aaKnown RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 TAF5Q15542 800 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 ZNF394Q53GI3 561 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 LRRC8BQ6P9F7 803 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 CYP4V2Q6ZWL3 525 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 PPP1R16BQ96T49 567 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 CDRT15Q96T59 188 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 CPNE1Q99829 537 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 ARHGAP39Q9C0H5 1083 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 ILKAPQ9H0C8 392 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 CDHR5Q9HBB8 845 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 UTP6Q9NYH9 597 aaKnown RBP16.15■□□□□ 0.18
HMGA1-202ENST00000347617 GTF2IRD1Q9UHL9 959 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 CYTH4Q9UIA0 394 aa16.15■□□□□ 0.18
HMGA1-202ENST00000347617 KANSL1LA0AUZ9 987 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 TRIM64CA6NLI5 447 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 C2CD4BA6NLJ0 364 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 HACD1B0YJ81 288 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 H3BNH8 94 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 AIM2O14862 343 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 PRKCGP05129 697 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 TYK2P29597 1187 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 PPARGP37231 505 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-202ENST00000347617 PSMD8P48556 350 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 NRLP54845 237 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 PRKCZQ05513 592 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 CACNB2Q08289 660 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-202ENST00000347617 ZBTB6Q15916 424 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 KCTD21Q4G0X4 260 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 C6orf52Q5T4I8 152 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 SYCP2LQ5T4T6 812 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 FAM102AQ5T9C2 384 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-202ENST00000347617 ALKAL1Q6UXT8 129 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 AMIGO2Q86SJ2 522 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 CARM1Q86X55 608 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 SNX32Q86XE0 403 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 BHLHE22Q8NFJ8 381 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-202ENST00000347617 ITPKCQ96DU7 683 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 SGF29Q96ES7 293 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 QKIQ96PU8 341 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGA1-202ENST00000347617 OSMRQ99650 979 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 PKP2Q99959 881 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 TBC1D23Q9NUY8 699 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 CDH7Q9ULB5 785 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 RAP2CQ9Y3L5 183 aa16.14■□□□□ 0.17
HMGA1-202ENST00000347617 SCN10AQ9Y5Y9 1956 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms