RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 PSD3Q9NYI0 1048 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 NUDT17P0C025 328 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 ADAM17P78536 824 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 POU6F1Q14863 301 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 NLRP14Q86W24 1093 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 RNF135Q8IUD6 432 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 GPR65Q8IYL9 337 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 OR2W6PQ8NHA6 318 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 ACDQ96AP0 544 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 SLC2A13Q96QE2 648 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 EBNA1BP2Q99848 306 aaKnown RBP13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 SLC25A51Q9H1U9 297 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 DNAJB4Q9UDY4 337 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 C1RP00736 705 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 BMPR1AP36894 532 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 FAM189BP81408 668 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 PPARDQ03181 441 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 DMC1Q14565 340 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 LRRC8BQ6P9F7 803 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 CHST9Q7L1S5 443 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 SCAMP5Q8TAC9 235 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 HDAC7Q8WUI4 952 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 HEXDCQ8WVB3 486 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 LGMNQ99538 433 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 SERPINI1Q99574 410 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 VCXQ9H320 206 aa13.91□□□□□ -0.18
CSNK1G3-201ENST00000345990 ABLIM1O14639 778 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 HGSO14964 777 aaPredicted RBP13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 SPATA31D3P0C874 917 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 MLLT6P55198 1093 aaPredicted RBP13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 CLLU1OSQ5K130 101 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 SPATA31D4Q6ZUB0 917 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 RBM23Q86U06 439 aaKnown RBP13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 C4orf33Q8N1A6 199 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 KBTBD7Q8WVZ9 684 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 SH3KBP1Q96B97 665 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 C1orf74Q96LT6 269 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 KCTD5Q9NXV2 234 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 UBP1Q9NZI7 540 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 SAE1Q9UBE0 346 aaPredicted RBP13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 CDK5RAP2Q96SN8 1893 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 DDHD2O94830 711 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 GRK2P25098 689 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 TAF5Q15542 800 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 IMPG1Q17R60 797 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 MYO1HQ8N1T3 1032 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 GBA3Q9H227 469 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 WDR27A2RRH5 827 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 MFSD11O43934 449 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 FGFR3P22607 806 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 CD86P42081 329 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 AARSP49588 968 aaKnown RBP eCLIP13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 IFT88Q13099 833 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 RALGPS1Q5JS13 557 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 ACMSDQ8TDX5 336 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 POF1BQ8WVV4 589 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 TOP1MTQ969P6 601 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 EPN3Q9H201 632 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 MPP6Q9NZW5 540 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 IGSF9Q9P2J2 1179 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 TMEM59LQ9UK28 342 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 TMCO1Q9UM00 188 aa13.9□□□□□ -0.18
CSNK1G3-201ENST00000345990 ILVBLA1L0T0 632 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 APODP05090 189 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 KRT4P19013 534 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 WEE1P30291 646 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 CCDC153Q494R4 210 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 TTC31Q49AM3 519 aaPredicted RBP13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 LRRC8EQ6NSJ5 796 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 FAM171BQ6P995 826 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 SLC22A9Q8IVM8 553 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 PCDH19Q8TAB3 1148 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 OR8D1Q8WZ84 308 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 NDRG1Q92597 394 aaKnown RBP13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 CPSF2Q9P2I0 782 aaKnown RBP13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 CCDC78A2IDD5 438 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 CTSAP10619 480 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 SYN1P17600 705 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 CDK7P50613 346 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 NKX3-2P78367 333 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 ARMC3Q5W041 872 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 NEPROQ6NW34 567 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 ARL14EPQ8N8R7 260 aaPredicted RBP13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 GPR62Q9BZJ7 368 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 ZFP14Q9HCL3 533 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 TAS2R13Q9NYV9 303 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 FOCADQ5VW36 1801 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 KPNA5O15131 536 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 GBE1Q04446 702 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 FBXL19Q6PCT2 694 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■■□ 22
CSNK1G3-201ENST00000345990 STK38LQ9Y2H1 464 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 ESRRAP11474 423 aaPredicted RBP13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 OCRLQ01968 901 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 DSG1Q02413 1049 aa13.89□□□□□ -0.19
CSNK1G3-201ENST00000345990 FAM47EQ6ZV65 393 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms