RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SAPCD2Q86UD0 394 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 POU5F2Q8N7G0 328 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 ZNF781Q8N8C0 355 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 DTX3LQ8TDB6 740 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 MYCBPQ99417 103 aaPredicted RBP15.71■□□□□ 0.11
UPF3B-202ENST00000345865 THTPAQ9BU02 230 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 OSER1Q9NX31 292 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 CPSF2Q9P2I0 782 aaKnown RBP15.71■□□□□ 0.11
UPF3B-202ENST00000345865 SLC39A10Q9ULF5 831 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 APOBEC2Q9Y235 224 aaKnown RBP15.71■□□□□ 0.11
UPF3B-202ENST00000345865 AHSGP02765 367 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 MPOP05164 745 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 SBK3P0C264 359 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 HOXC13P31276 330 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 ABL2P42684 1182 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 ERFP50548 548 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 RAB27AP51159 221 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 CSE1LP55060 971 aaKnown RBP15.71■□□□□ 0.1
UPF3B-202ENST00000345865 CAP1Q01518 475 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 POU6F1Q14863 301 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 KCNA10Q16322 511 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 BEND5Q7L4P6 421 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 C14orf80Q86SX3 495 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 ZC3HC1Q86WB0 502 aaKnown RBP15.71■□□□□ 0.1
UPF3B-202ENST00000345865 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 ATPAF2Q8N5M1 289 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 PPP4R1Q8TF05 950 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 SUSD3Q96L08 255 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 HAPLN3Q96S86 360 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 ZIC5Q96T25 663 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 IL12RB2Q99665 862 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 C1QTNF1Q9BXJ1 281 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 NMRAL1Q9HBL8 299 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 DNAJC28Q9NX36 388 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 PCDHB12Q9Y5F1 795 aa15.71■□□□□ 0.1
UPF3B-202ENST00000345865 TM7SF2O76062 418 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 ARNTP27540 789 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 GRIK1P39086 918 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 CDK7P50613 346 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 ZNF33AQ06730 810 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 PRPSAP1Q14558 356 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 TBCCQ15814 346 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 BTBD8Q5XKL5 378 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 ZNF598Q86UK7 904 aaKnown RBP15.7■□□□□ 0.1
UPF3B-202ENST00000345865 SCUBE1Q8IWY4 988 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 ULK2Q8IYT8 1036 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 IPMKQ8NFU5 416 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 MAPK15Q8TD08 544 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 PANX3Q96QZ0 392 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 GPR22Q99680 433 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 TBL1YQ9BQ87 522 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 SMOC2Q9H3U7 446 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 STN1Q9H668 368 aaKnown RBP15.7■□□□□ 0.1
UPF3B-202ENST00000345865 ABCC13Q9NSE7 274 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 TRMT13Q9NUP7 481 aaKnown RBP15.7■□□□□ 0.1
UPF3B-202ENST00000345865 MPP6Q9NZW5 540 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 SLC7A8Q9UHI5 535 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 DSEQ9UL01 958 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 SORCS3Q9UPU3 1222 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 MYO16Q9Y6X6 1858 aa15.7■□□□□ 0.1
UPF3B-202ENST00000345865 TK2O00142 265 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 PHGDHO43175 533 aaKnown RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SEPT4O43236 478 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 TIMM44O43615 452 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SAT1P21673 171 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 CYP2C18P33260 490 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 FLT3LGP49771 235 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 COG7P83436 770 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SLC25A3Q00325 362 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 CACNB2Q08289 660 aaPredicted RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SDHAF4Q5VUM1 108 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 ZNF280BQ86YH2 543 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SPNS2Q8IVW8 549 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 MFSD6LQ8IWD5 586 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 DENND6AQ8IWF6 608 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 FCRL5Q96RD9 977 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 FTHL17Q9BXU8 183 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 GLOD4Q9HC38 313 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 NMRK2Q9NPI5 230 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 MAN1C1Q9NR34 630 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SLC2A6Q9UGQ3 507 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 MOCS2O96007 188 aaPredicted RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 HLA-DQB2P05538 268 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 CCR1P32246 355 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 CCR10P46092 362 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 TSPY1Q01534 308 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 NAA25Q14CX7 972 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 BRMS1LQ5PSV4 323 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 MFSD14CQ5VZR4 134 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 CCSAPQ6IQ19 270 aaPredicted RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 PKN3Q6P5Z2 889 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SPATA2LQ8IUW3 424 aaPredicted RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 FICDQ9BVA6 458 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 GATA5Q9BWX5 397 aaPredicted RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 SHCBP1LQ9BZQ2 653 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 C1orf21Q9H246 121 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 ATXN3LQ9H3M9 355 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 COG4Q9H9E3 785 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms