RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CBX5P45973 191 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 IDH2P48735 452 aaKnown RBP19.63■□□□□ 0.73
HDAC4-201ENST00000345617 CYP2R1Q6VVX0 501 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 EFHD2Q96C19 240 aaPredicted RBP19.63■□□□□ 0.73
HDAC4-201ENST00000345617 ACOX2Q99424 681 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 GMIPQ9P107 970 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 DHRS12A0PJE2 317 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 AGAP11Q8TF27 550 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 SLC9A8Q9Y2E8 581 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 MROH2AA6NES4 1674 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 CBX6O95503 412 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 OFCC1Q8IZS5 231 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 HTR3CQ8WXA8 447 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 FBXO44Q9H4M3 255 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 PPIBP23284 216 aaKnown RBP19.63■□□□□ 0.73
HDAC4-201ENST00000345617 DDI2Q5TDH0 399 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 NSUN4Q96CB9 384 aaKnown RBP19.63■□□□□ 0.73
HDAC4-201ENST00000345617 CGRRF1Q99675 332 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 NARFQ9UHQ1 456 aa19.63■□□□□ 0.73
HDAC4-201ENST00000345617 OR14I1A6ND48 311 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 ITGB3P05106 788 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 TMCO6Q96DC7 493 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 TCF12Q99081 682 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 SNX6Q9UNH7 406 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 METTL6Q8TCB7 284 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 PSME2Q9UL46 239 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 HALP42357 657 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 EIF5AP63241 154 aaKnown RBP19.62■□□□□ 0.73
HDAC4-201ENST00000345617 SNX7Q9UNH6 387 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 PTPN3P26045 913 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 TRMT13Q9NUP7 481 aaKnown RBP19.62■□□□□ 0.73
HDAC4-201ENST00000345617 TAF6LQ9Y6J9 622 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 PAX3P23760 479 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 NTSP30990 170 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 ATL1Q8WXF7 558 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 RBM4BQ9BQ04 359 aaKnown RBP19.62■□□□□ 0.73
HDAC4-201ENST00000345617 RBM4Q9BWF3 364 aaKnown RBP19.62■□□□□ 0.73
HDAC4-201ENST00000345617 SNAP23O00161 211 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 HPS1Q92902 700 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 SEMA6AQ9H2E6 1030 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 VPS45Q9NRW7 570 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 MAP2K7O14733 419 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 MTM1Q13496 603 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 SLC47A2Q86VL8 602 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 OPTCQ9UBM4 332 aa19.62■□□□□ 0.73
HDAC4-201ENST00000345617 FOLH1Q04609 750 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PLD1Q13393 1074 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 KBTBD2Q8IY47 623 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 TBC1D21Q8IYX1 336 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 TBC1D10AQ9BXI6 508 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 TRIM2Q9C040 744 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 ARMCX1Q9P291 453 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 A0A1W2PQ72 361 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 TRIM28Q13263 835 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 TAF13Q15543 124 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 RABL6Q3YEC7 729 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 R3HCC1LQ7Z5L2 792 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 HIPK1Q86Z02 1210 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 ERMAPQ96PL5 475 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 UPB1Q9UBR1 384 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 TCEA2Q15560 299 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 MTSS1LQ765P7 747 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 MLXQ9UH92 298 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 POLR2LP62875 67 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 SWI5Q1ZZU3 235 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PIWIL4Q7Z3Z4 852 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 ZNF655Q8N720 491 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 NYAP2Q9P242 653 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PCDHGA10Q9Y5H3 936 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 STK25O00506 426 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 ITIH1P19827 911 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PSMA1P25786 263 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 GCNT1Q02742 428 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 ARHGAP36Q6ZRI8 547 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 RTKNQ9BST9 563 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PIF1Q9H611 641 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 KCNH7Q9NS40 1196 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 CLIC5Q9NZA1 410 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 DRG2P55039 364 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 MTMR2Q13614 643 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 ZNF470Q6ECI4 717 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 ULK3Q6PHR2 472 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 IL27RAQ6UWB1 636 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PAGE2Q7Z2X7 111 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 NT5DC3Q86UY8 548 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 GPSM1Q86YR5 675 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 BBS4Q96RK4 519 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 C1QTNF7Q9BXJ2 289 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 SNX4O95219 450 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PGK1P00558 417 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 FGFR3P22607 806 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 PTGS2P35354 604 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 DMGDHQ9UI17 866 aaKnown RBP19.61■□□□□ 0.73
HDAC4-201ENST00000345617 GNPTGQ9UJJ9 305 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 DUSP10Q9Y6W6 482 aa19.61■□□□□ 0.73
HDAC4-201ENST00000345617 SLC25A27O95847 323 aa19.6■□□□□ 0.73
HDAC4-201ENST00000345617 CXCR2P25025 360 aa19.6■□□□□ 0.73
HDAC4-201ENST00000345617 MFSD7Q6UXD7 560 aa19.6■□□□□ 0.73
HDAC4-201ENST00000345617 PM20D2Q8IYS1 436 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms