RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 MAP9Q49MG5 647 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 HSF5Q4G112 596 aaPredicted RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FAM72AQ5TYM5 149 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 NAPEPLDQ6IQ20 393 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FAM72DQ6L9T8 149 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 LEKR1Q6ZMV7 388 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FAM72BQ86X60 149 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 IFT20Q8IY31 132 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FAM71DQ8N9W8 422 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TSTD1Q8NFU3 115 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 DDX47Q9H0S4 455 aaKnown RBP8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FBRSQ9HAH7 460 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TRPV5Q9NQA5 729 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 AMACRQ9UHK6 382 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 TBC1D30Q9Y2I9 924 aa8.31□□□□□ -1.08
HMGCR-202ENST00000343975 FAM170BA6NMN3 283 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 MATN3O15232 486 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 MAP3K13O43283 966 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 KDELR3O43731 214 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 IL1BP01584 269 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 NTSR1P30989 418 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 TNFRSF4P43489 277 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 GALK1P51570 392 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ARSEP51690 589 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 AP1S1P61966 158 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 DPYSQ14117 519 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 RAB6CQ53S08 254 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 OTUD1Q5VV17 481 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ERAP2Q6P179 960 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 HDAC11Q96DB2 347 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 OMDQ99983 421 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 FAM118BQ9BPY3 351 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 RAB6CQ9H0N0 254 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ZDHHC6Q9H6R6 413 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 LMAN1LQ9HAT1 526 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 RRAGDQ9NQL2 400 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 RAB6BQ9NRW1 208 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 DTLQ9NZJ0 730 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 VPS51Q9UID3 782 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 TSC2P49815 1807 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 IGLV3-10A0A075B6K4 115 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 PFDN6O15212 129 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ZNF185O15231 689 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 POP4O95707 220 aaKnown RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 COILP38432 576 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SOX9P48436 509 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 GPS1Q13098 491 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SERINC3Q13530 473 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 NCBP2-AS2Q69YL0 99 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SLC9A4Q6AI14 798 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 NPNTQ6UXI9 565 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 LINGO4Q6UY18 593 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 LINC00523Q86TU6 105 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ARFGAP1Q8N6T3 406 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SPATA4Q8NEY3 305 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ATG4AQ8WYN0 398 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ARHGEF2Q92974 986 aaKnown RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 RPL10LQ96L21 214 aaKnown RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 MAGEB5Q9BZ81 275 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SLC2A4RGQ9NR83 387 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 BFARQ9NZS9 450 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SMAPO00193 183 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 DCLK1O15075 740 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 HEXIM1O94992 359 aaKnown RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 MZF1P28698 734 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 RBL1P28749 1068 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 CD70P32970 193 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 MAGEA9P43362 315 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 GALNT2Q10471 571 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 TRIP13Q15645 432 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 INO80DQ53TQ3 878 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ARMC12Q5T9G4 340 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 FYB2Q5VWT5 728 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 FBXL19Q6PCT2 694 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SYNPOQ8N3V7 929 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 OLIG1Q8TAK6 271 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 CYB5D2Q8WUJ1 264 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 WBP2Q969T9 261 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SRPK1Q96SB4 655 aaKnown RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 LGMNQ99538 433 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 TTC1Q99614 292 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 HEPHQ9BQS7 1158 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 RPP25Q9BUL9 199 aaKnown RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 TTC7AQ9ULT0 858 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ERVW-1Q9UQF0 538 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 SLC27A6Q9Y2P4 619 aa8.3□□□□□ -1.08
HMGCR-202ENST00000343975 ZNF638Q14966 1978 aaKnown RBP8.29□□□□□ -1.08
HMGCR-202ENST00000343975 A0A0A0MRY4 1105 aa8.29□□□□□ -1.08
HMGCR-202ENST00000343975 SNAP91O60641 907 aa8.29□□□□□ -1.08
HMGCR-202ENST00000343975 PMPCBO75439 489 aa8.29□□□□□ -1.08
HMGCR-202ENST00000343975 ACVRL1P37023 503 aa8.29□□□□□ -1.08
HMGCR-202ENST00000343975 GLE1Q53GS7 698 aaKnown RBP8.29□□□□□ -1.08
HMGCR-202ENST00000343975 IPMKQ8NFU5 416 aa8.29□□□□□ -1.08
HMGCR-202ENST00000343975 PRCCQ92733 491 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-202ENST00000343975 PRICKLE1Q96MT3 831 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-202ENST00000343975 SPATA13Q96N96 652 aa8.29□□□□□ -1.08
HMGCR-202ENST00000343975 QKIQ96PU8 341 aaKnown RBP eCLIP8.29□□□□□ -1.082e-6■■■■■ 32.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms