RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SPATA7Q9P0W8 599 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 HNRNPLP14866 589 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLCN1-201ENST00000343257 PTGER2P43116 358 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 CLCN2P51788 898 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 ZNF829Q3KNS6 432 aaPredicted RBP15.12■□□□□ 0.01
CLCN1-201ENST00000343257 AGKQ53H12 422 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 METTL21CQ5VZV1 264 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 DHRS4L2Q6PKH6 230 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 WDR49Q8IV35 697 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 RAVER1Q8IY67 606 aaKnown RBP15.12■□□□□ 0.01
CLCN1-201ENST00000343257 MCRS1Q96EZ8 462 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 CCDC97Q96F63 343 aaPredicted RBP15.12■□□□□ 0.01
CLCN1-201ENST00000343257 PPP1R16BQ96T49 567 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 EGFL7Q9UHF1 273 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 STYXL1Q9Y6J8 313 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 SQORQ9Y6N5 450 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 V9GYQ6 96 aa15.12■□□□□ 0.01
CLCN1-201ENST00000343257 COL14A1Q05707 1796 aaKnown RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 MT-ND1P03886 318 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 TPH1P17752 444 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 EEF1B2P24534 225 aaKnown RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 MAP4P27816 1152 aaKnown RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 CCDC153Q494R4 210 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 TP53INP2Q8IXH6 220 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 SREK1Q8WXA9 508 aaKnown RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 CERS2Q96G23 380 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 MTG1Q9BT17 334 aaPredicted RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 NPLQ9BXD5 320 aaPredicted RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 ACE2Q9BYF1 805 aaPredicted RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 XYLT2Q9H1B5 865 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 ZBTB26Q9HCK0 441 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 VPS51Q9UID3 782 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 AP4E1Q9UPM8 1137 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 PCDHGA7Q9Y5G6 932 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 B4GAT1O43505 415 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 OXSR1O95747 527 aaPredicted RBP15.11■□□□□ 0.01
CLCN1-201ENST00000343257 TGM2P21980 687 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 CAPSQ13938 189 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 KIZQ2M2Z5 673 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 STXBP5Q5T5C0 1151 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 NANOGNBQ7Z5D8 188 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 OR9I1Q8NGQ6 314 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 URGCPQ8TCY9 931 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 TANKQ92844 425 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 ST14Q9Y5Y6 855 aa15.11■□□□□ 0.01
CLCN1-201ENST00000343257 BMP10O95393 424 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 TNNC2P02585 160 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 GJB1P08034 283 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 GPD2P43304 727 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 DPYSQ14117 519 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 PRPSAP1Q14558 356 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 KCTD8Q6ZWB6 473 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 DNAAF3Q8N9W5 541 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 MFSD3Q96ES6 412 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 HNRNPABQ99729 332 aaKnown RBP15.1■□□□□ 0.01
CLCN1-201ENST00000343257 LPIN3Q9BQK8 851 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 TMPRSS4Q9NRS4 437 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 VPS45Q9NRW7 570 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 RAP2CQ9Y3L5 183 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 DGKBQ9Y6T7 804 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 H0YCG3 227 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 PGAM1P18669 254 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 SDC4P31431 198 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 RCVRNP35243 200 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 CNTN2Q02246 1040 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 SEPT6Q14141 434 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 CARTPTQ16568 116 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 PPP1R3AQ16821 1122 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 NHSL2Q5HYW2 709 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 PODNQ7Z5L7 613 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 BTLAQ7Z6A9 289 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 TMEM126BQ8IUX1 230 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 SIX6OS1Q8N1H7 587 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 KCTD4Q8WVF5 259 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 CASP10Q92851 521 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 RTP4Q96DX8 246 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 IARS2Q9NSE4 1012 aaKnown RBP15.1■□□□□ 0.01
CLCN1-201ENST00000343257 RUVBL2Q9Y230 463 aaKnown RBP15.1■□□□□ 0.01
CLCN1-201ENST00000343257 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 ADGRA2Q96PE1 1338 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 HEATR9A2RTY3 570 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 KCNK1O00180 336 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 CXCL8P10145 99 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 NCAM1P13591 858 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 TPSB2P20231 275 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 CYP3A5P20815 502 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 PDK2Q15119 407 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 TPSAB1Q15661 275 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 MAP1SQ66K74 1059 aaPredicted RBP15.1■□□□□ 0.01
CLCN1-201ENST00000343257 LRRC71Q8N4P6 559 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 HTR3CQ8WXA8 447 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 ASB9Q96DX5 294 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 CNDP1Q96KN2 507 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 PORCNQ9H237 461 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 LHX5Q9H2C1 402 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 PCDH12Q9NPG4 1184 aa15.1■□□□□ 0.01
CLCN1-201ENST00000343257 CFAP99D6REC4 459 aa15.09■□□□□ 0.01
CLCN1-201ENST00000343257 GPR25O00155 361 aa15.09■□□□□ 0.01
CLCN1-201ENST00000343257 RGS20O76081 388 aa15.09■□□□□ 0.01
CLCN1-201ENST00000343257 ITGB3P05106 788 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms