RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PLA2G5P39877 138 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 NBL1P41271 181 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 KIR2DL1P43626 348 aaPredicted RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 CXCL12P48061 93 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SLC11A2P49281 568 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 ZNF75DP51815 510 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 MRPS21P82921 87 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 MPPE1Q53F39 396 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 MPP7Q5T2T1 576 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 FAM102AQ5T9C2 384 aaPredicted RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 NADSYN1Q6IA69 706 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 GRAMD4Q6IC98 578 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 LVRNQ6Q4G3 990 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 MMS22LQ6ZRQ5 1243 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 MON1BQ7L1V2 547 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SFTPA1Q8IWL2 248 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 ACDQ96AP0 544 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SLC2A11Q9BYW1 496 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 RRAGDQ9NQL2 400 aaPredicted RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 DNAJC17Q9NVM6 304 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 KLHL11Q9NVR0 708 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 C2orf42Q9NWW7 574 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 PNMA8BQ9ULN7 279 aaPredicted RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 DMTF1Q9Y222 760 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 TCRBV5S1A1TA0A578 114 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 KCNU1A8MYU2 1149 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 MUC22E2RYF6 1773 aaPredicted RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 PROB1E7EW31 1015 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 MT-CO1P00395 513 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 CYBBP04839 570 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SLC6A4P31645 630 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 GBP1P32455 592 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 FLT3P36888 993 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 NSFP46459 744 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 RENBPP51606 427 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 KDSRQ06136 332 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 MTA1Q13330 715 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 PPP2R5DQ14738 602 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 ASIC2Q16515 512 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 C2CD6Q53TS8 623 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 PIK3R6Q5UE93 754 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 TRNP1Q6NT89 227 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SYT13Q7L8C5 426 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SULF2Q8IWU5 870 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 NAT16Q8N8M0 369 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 ZBTB44Q8NCP5 570 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 ANP32BQ92688 251 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 SYN2Q92777 582 aaPredicted RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 PRICKLE1Q96MT3 831 aaPredicted RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 DDX50Q9BQ39 737 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 C11orf70Q9BRQ4 267 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 XPO4Q9C0E2 1151 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 MUC3BQ9H195 1237 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
TPM3-207ENST00000341372 FAM204AQ9H8W3 233 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.6□□□□□ -0.71
TPM3-207ENST00000341372 DDIT4Q9NX09 232 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.6□□□□□ -0.71
TPM3-207ENST00000341372 CALCOCO1Q9P1Z2 691 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 STAP1Q9ULZ2 295 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 ANKRD6Q9Y2G4 727 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 STARD13Q9Y3M8 1113 aa10.6□□□□□ -0.71
TPM3-207ENST00000341372 TRIM24O15164 1050 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 CBFA2T2O43439 604 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 LILRB5O75023 590 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 APOEP02649 317 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 GYPCP04921 128 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 CALB1P05937 261 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 TPM3P06753 285 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 SLC2A3P11169 496 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 GPC1P35052 558 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 INAVAQ3KP66 663 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 SLC25A52Q3SY17 297 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 ZC3H12AQ5D1E8 599 aaKnown RBP10.59□□□□□ -0.71
TPM3-207ENST00000341372 PPP1R2P3Q6NXS1 205 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 ADAMTSL4Q6UY14 1074 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 DRC7Q8IY82 874 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.59□□□□□ -0.71
TPM3-207ENST00000341372 C3orf20Q8ND61 904 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 RPLP0P6Q8NHW5 317 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 SLC30A5Q8TAD4 765 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 BTN2A3PQ96KV6 586 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 PLK2Q9NYY3 685 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 CAPN11Q9UMQ6 739 aa10.59□□□□□ -0.71
TPM3-207ENST00000341372 ANTXRLA6NF34 631 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 SNUPNO95149 360 aaKnown RBP10.58□□□□□ -0.72
TPM3-207ENST00000341372 CCR1P32246 355 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 CASP2P42575 452 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 SGSHP51688 502 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 ZBED6P86452 979 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 CSTF1Q05048 431 aaKnown RBP10.58□□□□□ -0.72
TPM3-207ENST00000341372 PCBP2Q15366 365 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■■■□□ 17.3
TPM3-207ENST00000341372 MS4A13Q5J8X5 152 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 BRMS1LQ5PSV4 323 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 NLRC3Q7RTR2 1065 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 ZNF571Q7Z3V5 609 aaPredicted RBP10.58□□□□□ -0.72
TPM3-207ENST00000341372 SRLQ86TD4 932 aa10.58□□□□□ -0.72
TPM3-207ENST00000341372 ATOH1Q92858 354 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms