RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ARHGAP12Q8IWW6 846 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 STK40Q8N2I9 435 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-202ENST00000340993 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 DEFB119Q8N690 84 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 GRIN3AQ8TCU5 1115 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 GABRG3Q99928 467 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 FAM118BQ9BPY3 351 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 MAK16Q9BXY0 300 aaKnown RBP13.49□□□□□ -0.25
TUBD1-202ENST00000340993 MKRN2Q9H000 416 aaKnown RBP13.49□□□□□ -0.25
TUBD1-202ENST00000340993 MAGEH1Q9H213 219 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 TMEM245Q9H330 911 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 SP110Q9HB58 689 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-202ENST00000340993 AMFRQ9UKV5 643 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 ANKRD36A6QL64 1941 aa13.49□□□□□ -0.25
TUBD1-202ENST00000340993 THADAQ6YHU6 1953 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 C3orf70A6NLC5 250 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 USP27XA6NNY8 438 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PLK4O00444 970 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PSTPIP1O43586 416 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 GABRG2P18507 467 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PSMD8P48556 350 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 METAP1P53582 386 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 SULT2A1Q06520 285 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PDK2Q15119 407 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 IFI16Q16666 785 aaKnown RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ATXN7L2Q5T6C5 722 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 NT5DC3Q86UY8 548 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 MMAAQ8IVH4 418 aaKnown RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PQLC3Q8N755 202 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ALG3Q92685 438 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PPP1R9BQ96SB3 815 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ZNF670Q9BS34 389 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 LRRC19Q9H756 370 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PRSS16Q9NQE7 514 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 CYP8B1Q9UNU6 501 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 TTC24A2A3L6 582 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 GJB3O75712 270 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ZMPSTE24O75844 475 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 SRPRAP08240 638 aaKnown RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 SERPINH1P50454 418 aaKnown RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PLK1P53350 603 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ADCY2Q08462 1091 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 SERINC3Q13530 473 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PARP15Q460N3 678 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 SPOCD1Q6ZMY3 1216 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PRR23BQ6ZRT6 265 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 UMODL1-AS1Q8N2C9 162 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ATPAF2Q8N5M1 289 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 CHST14Q8NCH0 376 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 GANCQ8TET4 914 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PTPRN2Q92932 1015 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 PHOX2BQ99453 314 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 ACE2Q9BYF1 805 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 DDX56Q9NY93 547 aaKnown RBP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 TTLL3Q9Y4R7 772 aa13.48□□□□□ -0.25
TUBD1-202ENST00000340993 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
TUBD1-202ENST00000340993 CEP192Q8TEP8 1941 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 APOL1O14791 398 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 AXIN1O15169 862 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 ZBTB24O43167 697 aaPredicted RBP13.47□□□□□ -0.25
TUBD1-202ENST00000340993 KDELR3O43731 214 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 ALDH1A2O94788 518 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 TMCC1O94876 653 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 CD160O95971 181 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 TDGF1P13385 188 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 HTR7P34969 479 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 CTNNA1P35221 906 aaKnown RBP13.47□□□□□ -0.25
TUBD1-202ENST00000340993 COPAP53621 1224 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 HNRNPA1L2Q32P51 320 aaKnown RBP13.47□□□□□ -0.25
TUBD1-202ENST00000340993 C9orf64Q5T6V5 341 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 RETSATQ6NUM9 610 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 ZNF783Q6ZMS7 281 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 FRS2Q8WU20 508 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 MRGPRX1Q96LB2 322 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 RNF157Q96PX1 679 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 HERPUD2Q9BSE4 406 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.47□□□□□ -0.25
TUBD1-202ENST00000340993 DOCK9Q9BZ29 2069 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 DNAH14Q0VDD8 3507 aa13.47□□□□□ -0.25
TUBD1-202ENST00000340993 EDDM13A0A1B0GTR0 161 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 RNF103O00237 685 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 ZRANB2O95218 330 aaKnown RBP eCLIP13.46□□□□□ -0.25
TUBD1-202ENST00000340993 IL1BP01584 269 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 CDKN2BP42772 138 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 HCAR3P49019 387 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 NDST2P52849 883 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 SLC10A2Q12908 348 aaPredicted RBP13.46□□□□□ -0.25
TUBD1-202ENST00000340993 LRRC38Q5VT99 294 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 ARMCX6Q7L4S7 300 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 ADAT2Q7Z6V5 191 aaKnown RBP13.46□□□□□ -0.25
TUBD1-202ENST00000340993 CCNYQ8ND76 341 aa13.46□□□□□ -0.25
TUBD1-202ENST00000340993 SIPA1Q96FS4 1042 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms