RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 DMAP1Q9NPF5 467 aaPredicted RBP14.65□□□□□ -0.06
CPSF7-201ENST00000340437 UBAP1Q9NZ09 502 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 GPRC5DQ9NZD1 345 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 XPR1Q9UBH6 696 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 CDYLQ9Y232 598 aa14.65□□□□□ -0.06
CPSF7-201ENST00000340437 YJEFN3A6XGL0 299 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 SETSIPP0DME0 302 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 RPS6KA3P51812 740 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 MTTPP55157 894 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 MAP7Q14244 749 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 RYBPQ8N488 228 aaPredicted RBP14.64□□□□□ -0.07
CPSF7-201ENST00000340437 NPWQ8N729 165 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 ZFP42Q96MM3 310 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 CCDC167Q9P0B6 97 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 GNEQ9Y223 722 aaKnown RBP14.64□□□□□ -0.07
CPSF7-201ENST00000340437 A0A1B0GTW7 788 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 RGSL1A5PLK6 1076 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 H3BNX3 289 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 MLNP12872 115 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 GRM5P41594 1212 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 COG7P83436 770 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 PITRM1Q5JRX3 1037 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 AMIGO2Q86SJ2 522 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 KBTBD7Q8WVZ9 684 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 LENG1Q96BZ8 264 aaPredicted RBP14.64□□□□□ -0.07
CPSF7-201ENST00000340437 PKP2Q99959 881 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 RTKNQ9BST9 563 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 PLEKHA5Q9HAU0 1116 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 HACD1B0YJ81 288 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 C9JVG2 144 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 HDAC3O15379 428 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 DNAJA2O60884 412 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 CRTAMO95727 393 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 SLC12A2P55011 1212 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 PRAMEP78395 509 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 SOX4Q06945 474 aaPredicted RBP14.64□□□□□ -0.07
CPSF7-201ENST00000340437 DYNC1I2Q13409 638 aaKnown RBP14.64□□□□□ -0.07
CPSF7-201ENST00000340437 LAMC2Q13753 1193 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 CEACAM7Q14002 265 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 GEN1Q17RS7 908 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 PRAMEF19Q5SWL8 479 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 OSTM1Q86WC4 334 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 FSTL5Q8N475 847 aaPredicted RBP14.64□□□□□ -0.07
CPSF7-201ENST00000340437 TTC39CQ8N584 583 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 PAF1Q8N7H5 531 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 B3GALNT2Q8NCR0 500 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 DNAJB3Q8WWF6 145 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 ATP6V1E2Q96A05 226 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 NAT9Q9BTE0 207 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 FAM96AQ9H5X1 160 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 TLL2Q9Y6L7 1015 aa14.64□□□□□ -0.07
CPSF7-201ENST00000340437 SMIM28A0A1B0GU29 152 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 KCNU1A8MYU2 1149 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 DYNC1LI2O43237 492 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 TPST1O60507 370 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 HOXA11P31270 313 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 ITKQ08881 620 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 CSHL1Q14406 222 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 MAP3K21Q5TCX8 1036 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 SLC27A1Q6PCB7 646 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 C16orf89Q6UX73 402 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 PSMD13Q9UNM6 376 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 CCL22O00626 93 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 GPC4O75487 556 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 SLC25A27O95847 323 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 MOCS2O96007 188 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 YBX3P16989 372 aaKnown RBP eCLIP14.63□□□□□ -0.077e-7■□□□□ 11.1
CPSF7-201ENST00000340437 PDAP1Q13442 181 aaKnown RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 SH3D19Q5HYK7 790 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 ARHGAP36Q6ZRI8 547 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 ARHGAP22Q7Z5H3 698 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 KBTBD6Q86V97 674 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 ZDHHC17Q8IUH5 632 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 DIS3LQ8TF46 1054 aaKnown RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 KCNN1Q92952 543 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 ABTB1Q969K4 478 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 SIKE1Q9BRV8 207 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 SNX13Q9Y5W8 968 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 HNRNPRO43390 633 aaKnown RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 ADRA1BP35368 520 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 NOMO2Q5JPE7 1267 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 NT5DC4Q86YG4 428 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 WNT8BQ93098 351 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 MLPHQ9BV36 600 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-201ENST00000340437 Q9H521 79 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 CAAP1Q9H8G2 361 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 DNAJB4Q9UDY4 337 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 SLC2A6Q9UGQ3 507 aa14.63□□□□□ -0.07
CPSF7-201ENST00000340437 ZCWPW2A0A1B0GU75 182 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 SEC24DO94855 1032 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-201ENST00000340437 ACADSBP45954 432 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 TAF6P49848 677 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 PTK2BQ14289 1009 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 GPR162Q16538 588 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 NADK2Q4G0N4 442 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 TWF2Q6IBS0 349 aaKnown RBP14.62□□□□□ -0.07
CPSF7-201ENST00000340437 PDZD4Q76G19 769 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-201ENST00000340437 STRADAQ7RTN6 431 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 SNX27Q96L92 541 aa14.62□□□□□ -0.07
CPSF7-201ENST00000340437 USP3Q9Y6I4 520 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms