RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 GALNT3Q14435 633 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 KYNUQ16719 465 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 C6orf10Q5SRN2 563 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 ANO7Q6IWH7 933 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 TAC4Q86UU9 113 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 RPL10LQ96L21 214 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 GRID1Q9ULK0 1009 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 DUSP10Q9Y6W6 482 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 FAM237AA0A1B0GTK4 181 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 HAPLN1P10915 354 aaPredicted RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 ADRA1BP35368 520 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 MAGOHP61326 146 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 PMF1Q6P1K2 205 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 CIR1Q86X95 450 aaPredicted RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 SLC22A17Q8WUG5 538 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 TAS2R14Q9NYV8 317 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 VAPBO95292 243 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ILF3Q12906 894 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■■■■□ 19.3
LIN54-201ENST00000340417 WDR45BQ5MNZ6 344 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 HERC2P3Q9BVR0 1158 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CLIC5Q9NZA1 410 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 USP12O75317 370 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 SUPT7LO94864 414 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 PIGRP01833 764 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 DAOAP59103 153 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CCZ1BP86790 482 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CCZ1P86791 482 aaPredicted RBP13.01□□□□□ -0.33
LIN54-201ENST00000340417 HSPA14Q0VDF9 509 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CYP2A13Q16696 494 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CCDC38Q502W7 563 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 NPNTQ6UXI9 565 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ZNF333Q96JL9 665 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 RAD51BO15315 384 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CCNT2O60583 730 aaKnown RBP13.01□□□□□ -0.33
LIN54-201ENST00000340417 ANXA6P08133 673 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 GPR15P49685 360 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 GNA12Q03113 381 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 LONRF1Q17RB8 773 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ZNF470Q6ECI4 717 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ALLCQ8N6M5 410 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CPXM1Q96SM3 734 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ZNF670Q9BS34 389 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ADAMTS10Q9H324 1103 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ACTR8Q9H981 624 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 PCDH9Q9HC56 1237 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CYLDQ9NQC7 956 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 GNPTGQ9UJJ9 305 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ISM1B1AKI9 464 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 GJB5O95377 273 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 VIPP01282 170 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 KRT4P19013 534 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 NFKB1P19838 968 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ABCE1P61221 599 aaKnown RBP13.01□□□□□ -0.33
LIN54-201ENST00000340417 LYPLAL1Q5VWZ2 237 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 DPEP2Q9H4A9 486 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 AHSPQ9NZD4 102 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 KLHL3Q9UH77 587 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 KPNA5O15131 536 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 ESRRAP11474 423 aaPredicted RBP13.01□□□□□ -0.33
LIN54-201ENST00000340417 PSMB4P28070 264 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 BLKP51451 505 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 PTPN20Q4JDL3 420 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 PSTKQ8IV42 348 aaKnown RBP13.01□□□□□ -0.33
LIN54-201ENST00000340417 BCAS4Q8TDM0 211 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 TUBB6Q9BUF5 446 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 SMG9Q9H0W8 520 aaKnown RBP13.01□□□□□ -0.33
LIN54-201ENST00000340417 SIK3Q9Y2K2 1263 aa13.01□□□□□ -0.33
LIN54-201ENST00000340417 PEX5P50542 639 aa13□□□□□ -0.33
LIN54-201ENST00000340417 CDC16Q13042 620 aa13□□□□□ -0.33
LIN54-201ENST00000340417 MAPK7Q13164 816 aa13□□□□□ -0.33
LIN54-201ENST00000340417 CSHL1Q14406 222 aa13□□□□□ -0.33
LIN54-201ENST00000340417 FBXO38Q6PIJ6 1188 aa13□□□□□ -0.33
LIN54-201ENST00000340417 KCNMB4Q86W47 210 aa13□□□□□ -0.33
LIN54-201ENST00000340417 GALNT13Q8IUC8 556 aa13□□□□□ -0.33
LIN54-201ENST00000340417 COLGALT2Q8IYK4 626 aa13□□□□□ -0.33
LIN54-201ENST00000340417 BEND7Q8N7W2 519 aaPredicted RBP13□□□□□ -0.33
LIN54-201ENST00000340417 ARHGDIAP52565 204 aa13□□□□□ -0.33
LIN54-201ENST00000340417 AUHQ13825 339 aaKnown RBP13□□□□□ -0.33
LIN54-201ENST00000340417 AGMOQ6ZNB7 445 aa13□□□□□ -0.33
LIN54-201ENST00000340417 RBM43Q6ZSC3 357 aaKnown RBP13□□□□□ -0.33
LIN54-201ENST00000340417 RNF157Q96PX1 679 aa13□□□□□ -0.33
LIN54-201ENST00000340417 P2RY13Q9BPV8 354 aa13□□□□□ -0.33
LIN54-201ENST00000340417 RBM47A0AV96 593 aaKnown RBP13□□□□□ -0.33
LIN54-201ENST00000340417 WDR27A2RRH5 827 aa13□□□□□ -0.33
LIN54-201ENST00000340417 ERI2A8K979 691 aaKnown RBP13□□□□□ -0.33
LIN54-201ENST00000340417 PIRTP0C851 137 aa13□□□□□ -0.33
LIN54-201ENST00000340417 TPRG1Q6ZUI0 275 aa13□□□□□ -0.33
LIN54-201ENST00000340417 XYLT1Q86Y38 959 aa13□□□□□ -0.33
LIN54-201ENST00000340417 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
LIN54-201ENST00000340417 KLK6Q92876 244 aa13□□□□□ -0.33
LIN54-201ENST00000340417 KREMEN1Q96MU8 473 aa13□□□□□ -0.33
LIN54-201ENST00000340417 FGFR1OP2Q9NVK5 253 aa13□□□□□ -0.33
LIN54-201ENST00000340417 GNG14A0A1W2PPG7 69 aa13□□□□□ -0.33
LIN54-201ENST00000340417 TEX28O15482 410 aa13□□□□□ -0.33
LIN54-201ENST00000340417 CDH16O75309 829 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms