RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 HEMGNQ9BXL5 484 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 COQ10BQ9H8M1 238 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 VRTNQ9H8Y1 702 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 VPS37BQ9H9H4 285 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PNPLA3Q9NST1 481 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 IPO11Q9UI26 975 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 KIAA1257Q9ULG3 409 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 SHOC2Q9UQ13 582 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MYRFQ9Y2G1 1151 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CSADQ9Y600 493 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 A0A1W2PQ45 241 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 A0A1W2PQY0 241 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TEX28O15482 410 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 AKAP10O43572 662 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ZMPSTE24O75844 475 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MYO1DO94832 1006 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 KITP10721 976 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 UNGP13051 313 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ELNP15502 786 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 HSPA14Q0VDF9 509 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 RARS2Q5T160 578 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TEDDM1Q5T9Z0 273 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MBLAC2Q68D91 279 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 GTF2IRD2BQ6EKJ0 949 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 LLGL2Q6P1M3 1020 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 RTN4RL1Q86UN2 441 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 GTF2IRD2Q86UP8 949 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 TRIML2Q8N7C3 387 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 MUC3BQ9H195 1237 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 ADAMTS10Q9H324 1103 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 SNX25Q9H3E2 840 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CXorf21Q9HAI6 301 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PTBP2Q9UKA9 531 aaKnown RBP5.7□□□□□ -1.5
CSDE1-202ENST00000339438 PACSIN3Q9UKS6 424 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 SLC27A5Q9Y2P5 690 aa5.7□□□□□ -1.5
CSDE1-202ENST00000339438 CFAP99D6REC4 459 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 hCG_1984214I3L0E3 225 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CALUO43852 315 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 LYPLA2O95372 231 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ESRRBO95718 433 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CPNE6O95741 557 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TRIM49P0CI25 452 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TRIM49CP0CI26 452 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 RFX1P22670 979 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 GRK4P32298 578 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CSE1LP55060 971 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 PTPN11Q06124 597 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CAMK1Q14012 370 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 STILQ15468 1287 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ARHGAP44Q17R89 818 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 SLX4IPQ5VYV7 408 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 GPR141Q7Z602 305 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TTC30AQ86WT1 665 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CATSPER3Q86XQ3 398 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 SNX29P2Q8IUI4 249 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ADGRF2Q8IZF7 708 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 BEND7Q8N7W2 519 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CATSPER1Q8NEC5 780 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 E2F7Q96AV8 911 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 FKBP10Q96AY3 582 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF486Q96H40 463 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 OSBPL11Q9BXB4 747 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 NUF2Q9BZD4 464 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 STN1Q9H668 368 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF385DQ9H6B1 395 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 EMCNQ9ULC0 261 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TCAF1Q9Y4C2 921 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 PCDHB13Q9Y5F0 798 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 PLXNA2O75051 1894 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TBKBP1A7MCY6 615 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 PSMD11O00231 422 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 MCF2LO15068 1137 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ACOX3O15254 700 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 HTRA2O43464 458 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 BCAS2O75934 225 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TMEM63AO94886 807 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TOP3BO95985 862 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 APOEP02649 317 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 MMP3P08254 477 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 FGF3P11487 239 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 OPRL1P41146 370 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 PTPN9P43378 593 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 RPS6P62753 249 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 FAM189BP81408 668 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ITGADQ13349 1161 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 XKR4Q5GH76 650 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 PPP4R4Q6NUP7 873 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 KATNAL2Q8IYT4 538 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 OR13F1Q8NGS4 319 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 DUS3LQ96G46 650 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 SH3YL1Q96HL8 342 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 SHCBP1LQ9BZQ2 653 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TRIT1Q9H3H1 467 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CYP4F11Q9HBI6 524 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ST14Q9Y5Y6 855 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 FREM2Q5SZK8 3169 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TCRBV9S1A1TA0A576 114 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 DYTNA2CJ06 578 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CENPBD1B2RD01 187 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 C5orf67F2Z3F1 127 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms