RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 MT-CYBP00156 380 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SERPINE1P05121 402 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CKBP12277 381 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ALOX15P16050 662 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CALB2P22676 271 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PAX3P23760 479 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CCNCP24863 283 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TYK2P29597 1187 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PGGT1BP53609 377 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 USP46P62068 366 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PDE1BQ01064 536 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TSPY1Q01534 308 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZBTB16Q05516 673 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MAPRE1Q15691 268 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 WASHC2DQ5SRD0 308 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PIK3R6Q5UE93 754 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NAPRTQ6XQN6 538 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 KCNMB4Q86W47 210 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 COLGALT2Q8IYK4 626 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TMEM151AQ8N4L1 468 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ENDOVQ8N8Q3 282 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DNAAF3Q8N9W5 541 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ATXN7L3BQ96GX2 97 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SLC39A13Q96H72 371 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 C1QTNF1Q9BXJ1 281 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 OXCT2Q9BYC2 517 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 IL22Q9GZX6 179 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RGS18Q9NS28 235 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RPL26L1Q9UNX3 145 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 C15orf41Q9Y2V0 281 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 HS3ST4Q9Y661 456 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PLXNA3P51805 1871 aa13.21□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GOLGA8TH3BQL2 631 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TMEM189-UBE2V1I3L0A0 370 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 DFFAO00273 331 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CCDC22O60826 627 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 OAZ2O95190 189 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 HLA-DQB2P05538 268 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SBK3P0C264 359 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TPBGLP0DKB5 382 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SLC1A6P48664 564 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 HARS2P49590 506 aaKnown RBP13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SERPINB8P50452 374 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RASSF2P50749 326 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CCNG1P51959 295 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CSE1LP55060 971 aaKnown RBP13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 FAM189BP81408 668 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 NRG1Q02297 640 aaPredicted RBP13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 YWHAHQ04917 246 aaPredicted RBP13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 IHHQ14623 411 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PPP2R5DQ14738 602 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 LHX8Q68G74 356 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 THEM5Q8N1Q8 247 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TTC9BQ8N6N2 239 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RNF34Q969K3 372 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 FCRL5Q96RD9 977 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 WWP1Q9H0M0 922 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GLOD4Q9HC38 313 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PNPOQ9NVS9 261 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PLA2G4CQ9UP65 541 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SQORQ9Y6N5 450 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MYLKQ15746 1914 aa13.21□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MATN3O15232 486 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ENTPD5O75356 428 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 C2P06681 752 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CCR1P32246 355 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SPRP35270 261 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GRIK1P39086 918 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CPA2P48052 419 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ARCN1P48444 511 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CDH17Q12864 832 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MPP3Q13368 585 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 BTBD8Q5XKL5 378 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MSANTD2Q6P1R3 559 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ATPAF2Q8N5M1 289 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 VPS39Q96JC1 886 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ZNF570Q96NI8 536 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GPR22Q99680 433 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TUBB6Q9BUF5 446 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TRIM62Q9BVG3 475 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CRISPLD2Q9H0B8 497 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 C20orf96Q9NUD7 363 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MPP6Q9NZW5 540 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PPARGC1AQ9UBK2 798 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 DNAJB4Q9UDY4 337 aa13.2□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CCDC78A2IDD5 438 aa13.19□□□□□ -0.3
CDK5RAP1-201ENST00000339269 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
CDK5RAP1-201ENST00000339269 E9PAM4 449 aa13.19□□□□□ -0.3
CDK5RAP1-201ENST00000339269 FGF10O15520 208 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SKIP12755 728 aa13.19□□□□□ -0.3
CDK5RAP1-201ENST00000339269 EZRP15311 586 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms