RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ZUFSPQ96AP4 578 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 FBXL8Q96CD0 374 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 TMEM121Q9BTD3 319 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 BOLA2Q9H3K6 86 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ELAC1Q9H777 363 aaKnown RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 RGS18Q9NS28 235 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 UFSP2Q9NUQ7 469 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 PAK1IP1Q9NWT1 392 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 UCKL1Q9NWZ5 548 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF224Q9NZL3 707 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ADAMTS6Q9UKP5 1117 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ING4Q9UNL4 249 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 GDAQ9Y2T3 454 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ASTN2O75129 1339 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 A8MVJ9 347 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 COPEO14579 308 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 PTP4A3O75365 173 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ATG7O95352 703 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 PCSK2P16519 638 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 GMPRP36959 345 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 RPL21P46778 160 aaKnown RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 HADHBP55084 474 aaKnown RBP4.22□□□□□ -1.73
NEDD4-201ENST00000338963 NCF4Q15080 339 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF124Q15973 351 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 EXOC3L4Q17RC7 722 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 SPATS1Q496A3 300 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 XKR5Q6UX68 686 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 UNC5DQ6UXZ4 953 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ZBTB49Q6ZSB9 765 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 NT5DC3Q86UY8 548 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 PLD3Q8IV08 490 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 PLD5Q8N7P1 536 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 MFSD2AQ8NA29 543 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 CLHC1Q8NHS4 586 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 CABLES1Q8TDN4 633 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ELMO1Q92556 727 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 TCEAL3Q969E4 200 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 PHF12Q96QT6 1004 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 SLC19A3Q9BZV2 496 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 COG4Q9H9E3 785 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 NTN4Q9HB63 628 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 CABP5Q9NP86 173 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 CCNB1IP1Q9NPC3 277 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 DCDC2Q9UHG0 476 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 ENTPD4Q9Y227 616 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 POMPQ9Y244 141 aa4.22□□□□□ -1.73
NEDD4-201ENST00000338963 A0A1W2PQ67 120 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 TRIM38O00635 465 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 CST8O60676 142 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 PLA2G6O60733 806 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 CYP2D6P10635 497 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 HSPD1P10809 573 aaKnown RBP4.21□□□□□ -1.73
NEDD4-201ENST00000338963 CSF2RAP15509 400 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 FGFR3P22607 806 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 GLDCP23378 1020 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 IL13P35225 146 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 ARHGDIBP52566 201 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 PSMC5P62195 406 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 MVKQ03426 396 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 GAD2Q05329 585 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 PUDPQ08623 228 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 TRIM28Q13263 835 aaKnown RBP4.21□□□□□ -1.73
NEDD4-201ENST00000338963 TRIM25Q14258 630 aaKnown RBP4.21□□□□□ -1.73
NEDD4-201ENST00000338963 PRKD1Q15139 912 aaPredicted RBP4.21□□□□□ -1.73
NEDD4-201ENST00000338963 ATP13A5Q4VNC0 1218 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 BRDTQ58F21 947 aaPredicted RBP4.21□□□□□ -1.73
NEDD4-201ENST00000338963 YIF1BQ5BJH7 314 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 FAM209BQ5JX69 171 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 RETSATQ6NUM9 610 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 PNCKQ6P2M8 343 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF782Q6ZMW2 699 aaPredicted RBP4.21□□□□□ -1.73
NEDD4-201ENST00000338963 SGMS1Q86VZ5 419 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 OR7A2PQ8NGA2 310 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 OR4D10Q8NGI6 311 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 RP9Q8TA86 221 aaKnown RBP4.21□□□□□ -1.73
NEDD4-201ENST00000338963 SNX19Q92543 992 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 ZSWIM3Q96MP5 696 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 ACOXLQ9NUZ1 547 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 CMTM6Q9NX76 183 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 EBF1Q9UH73 591 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 PALLDQ8WX93 1383 aa4.21□□□□□ -1.73
NEDD4-201ENST00000338963 F6X3S4 739 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 H7C2Y5 167 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 HUS1O60921 280 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SRCP12931 536 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TNFAIP3P21580 790 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PTGIRP43119 386 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MAGEA4P43358 317 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RAB13P51153 203 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 AKR1D1P51857 326 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MPP1Q00013 466 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 EMC2Q15006 297 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 DDR2Q16832 855 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KNOP1Q1ED39 458 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ATAD3CQ5T2N8 411 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LRRC66Q68CR7 880 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CYP20A1Q6UW02 462 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 P3H2Q8IVL5 708 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KRT78Q8N1N4 520 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RHOXF1Q8NHV9 184 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms