RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MAGEA4P43358 317 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 OXCT1P55809 520 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 FASTKD3Q14CZ7 662 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 KYNUQ16719 465 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 LRIT3Q3SXY7 679 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 SPDYCQ5MJ68 293 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 MARC1Q5VT66 337 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 TRMT10CQ7L0Y3 403 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 ZBED8Q8IZ13 594 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 IQCKQ8N0W5 287 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 PDIK1LQ8N165 341 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 CELF5Q8N6W0 485 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 MCUQ8NE86 351 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 FGF13Q92913 245 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 C9orf72Q96LT7 481 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 SERPINB12Q96P63 405 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 ACE2Q9BYF1 805 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 TTYH1Q9H313 450 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 GLOD4Q9HC38 313 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 LMCD1Q9NZU5 365 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 TBC1D14Q9P2M4 693 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 CLEC4EQ9ULY5 219 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 GOLGA6BA6NDN3 693 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 RIPK2O43353 540 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 KDELR3O43731 214 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 ETFBP38117 255 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 VIPR2P41587 438 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 SPARCL1Q14515 664 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 SLC29A2Q14542 456 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 LBRQ14739 615 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 GRIN2CQ14957 1233 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 BBS9Q3SYG4 887 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 FAM78AQ5JUQ0 283 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 MPP7Q5T2T1 576 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 FYB2Q5VWT5 728 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 ALS2CLQ60I27 953 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 ZNF783Q6ZMS7 281 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 EP400NLQ6ZTU2 488 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 CAND1Q86VP6 1230 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 TMEM25Q86YD3 366 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 RELL1Q8IUW5 271 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 LRRC3BQ96PB8 259 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 MLPHQ9BV36 600 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 PDFQ9HBH1 243 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 NT5MQ9NPB1 228 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 EIF2B3Q9NR50 452 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 NINJ2Q9NZG7 142 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 UBP1Q9NZI7 540 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 CLEC1BQ9P126 229 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 PLAAQ9Y263 795 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 ACTL7AQ9Y615 435 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 WNT6Q9Y6F9 365 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 E7ESA3 106 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 CBX4O00257 560 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 ALOX15BO15296 676 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 ACSL3O95573 720 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 HOXB8P17481 243 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 WEE1P30291 646 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 CSKP41240 450 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 MMP13P45452 471 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 CDK16Q00536 496 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 DLX2Q07687 328 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 PRPSAP1Q14558 356 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 ZNF534Q76KX8 674 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 ANKMY2Q8IV38 441 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 TEX26Q8N6G2 289 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 OR2W6PQ8NHA6 318 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 SPATA22Q8NHS9 363 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 UHMK1Q8TAS1 419 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 RSPRY1Q96DX4 576 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 ASB16Q96NS5 453 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 FCRL5Q96RD9 977 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 FEM1AQ9BSK4 669 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 FRMD8Q9BZ67 464 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 ACBD3Q9H3P7 528 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 KIF9Q9HAQ2 790 aa15.02■□□□□ -0
CDK5RAP3-201ENST00000338399 EIF3HO15372 352 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■■□□□ 11.6
CDK5RAP3-201ENST00000338399 CACNG3O60359 315 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TBX10O75333 385 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 AP2A1O95782 977 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TTC4O95801 387 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MAXP61244 160 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SARNPP82979 210 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ITKQ08881 620 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OLIG2Q13516 323 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TMCO4Q5TGY1 634 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DENND2CQ68D51 928 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CCDC117Q8IWD4 279 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ST13P5Q8NFI4 369 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SMARCD2Q92925 531 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IRF7Q92985 503 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OXNAD1Q96HP4 312 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ZNF599Q96NL3 588 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PHACTR1Q9C0D0 580 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ZMYND15Q9H091 742 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SPHK2Q9NRA0 654 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CLDND1Q9NY35 253 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 VPS28Q9UK41 221 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 COLQQ9Y215 455 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OR51B4Q9Y5P0 310 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms