RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ALG3Q92685 438 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 HEMGNQ9BXL5 484 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 OSBPL8Q9BZF1 889 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 TMEM245Q9H330 911 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 SP110Q9HB58 689 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 KCND1Q9NSA2 647 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 UBA2Q9UBT2 640 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 IPO11Q9UI26 975 aaKnown RBP12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 HS3ST2Q9Y278 367 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 HEY1Q9Y5J3 304 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 MYOFQ9NZM1 2061 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 COL4A2P08572 1712 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 EDDM13A0A1B0GTR0 161 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 TTC34A8MYJ7 566 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 RNASEH1O60930 286 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 ADAM23O75077 832 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 PAPSS2O95340 614 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 MT-CO1P00395 513 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 SRCP12931 536 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 TGM2P21980 687 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 GLDCP23378 1020 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 PTPN7P35236 360 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 SERPINH1P50454 418 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 GNG11P61952 73 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 DYNLT1P63172 113 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 ARF5P84085 180 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 IL10RBQ08334 325 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 RFTN1Q14699 578 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 PDK1Q15118 436 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 LLGL1Q15334 1064 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 HNRNPA1L2Q32P51 320 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 SEL1L2Q5TEA6 688 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 ATPAF2Q8N5M1 289 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 NPWQ8N729 165 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 CCNYQ8ND76 341 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 TSTD1Q8NFU3 115 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 P3H4Q92791 437 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 ISG20Q96AZ6 181 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 CCDC114Q96M63 670 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 ZNF599Q96NL3 588 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 PRRX2Q99811 253 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 CEP44Q9C0F1 390 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 BRD8Q9H0E9 1235 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 FBRSQ9HAH7 460 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 FBXO4Q9UKT5 387 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 MFHAS1Q9Y4C4 1052 aa12.15□□□□□ -0.46
SPTLC1-202ENST00000337841 USP27XA6NNY8 438 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 J3KR12 359 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 K7ERQ8 282 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 KCNK3O14649 394 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 APBB3O95704 486 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 HLA-EP13747 358 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 PRKCHP24723 683 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 CCNCP24863 283 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 HOXA6P31267 233 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 RENBPP51606 427 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 NRLP54845 237 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 SATB1Q01826 763 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 GBE1Q04446 702 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 CSTF1Q05048 431 aaKnown RBP12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 GALNT2Q10471 571 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 CAMK2GQ13555 558 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 TIGD7Q6NT04 549 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 LEKR1Q6ZMV7 388 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 BBS12Q6ZW61 710 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 DSG4Q86SJ6 1040 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 PGBD3Q8N328 593 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 SLC35F6Q8N357 371 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 BBS5Q8N3I7 341 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 PCDH20Q8N6Y1 951 aaKnown RBP12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 TTC13Q8NBP0 860 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 NETO2Q8NC67 525 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 MYO19Q96H55 970 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 TSGA13Q96PP4 275 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 TLR10Q9BXR5 811 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 CARD9Q9H257 536 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 PRSS16Q9NQE7 514 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 HAUS2Q9NVX0 235 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 DTLQ9NZJ0 730 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 A0A0C4DFX4 3053 aa12.14□□□□□ -0.47
SPTLC1-202ENST00000337841 A0A1W2PQF6 199 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 TCRBV21S2A2A0A5A6 115 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 MFSD11O43934 449 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 BNIP3LO60238 219 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 MAFKO60675 156 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 NEBLO76041 1014 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 GARSP41250 739 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 SNRPD1P62314 119 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 RAD51Q06609 339 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF33AQ06730 810 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms