RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MPPE1Q53F39 396 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 FSCBQ5H9T9 825 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 CXorf57Q6NSI4 855 aaKnown RBP14.98□□□□□ -0.01
CBX3-201ENST00000337620 PYROXD1Q8WU10 500 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 GORASP1Q9BQQ3 440 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 FRMD8Q9BZ67 464 aaPredicted RBP14.98□□□□□ -0.01
CBX3-201ENST00000337620 GLOD4Q9HC38 313 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 ATP13A1Q9HD20 1204 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 NT5MQ9NPB1 228 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 NFS1Q9Y697 457 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 HELZP42694 1942 aaKnown RBP14.98□□□□□ -0.01
CBX3-201ENST00000337620 EIF3HO15372 352 aaKnown RBP eCLIP14.98□□□□□ -0.01
CBX3-201ENST00000337620 PRAMEF11O60813 436 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 LUC7L3O95232 432 aaKnown RBP14.98□□□□□ -0.01
CBX3-201ENST00000337620 SHBGP04278 402 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 OXCT1P55809 520 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 CDK16Q00536 496 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 ITKQ08881 620 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 HSP90B2PQ58FF3 399 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 CEP85LQ5SZL2 805 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 CAPN12Q6ZSI9 719 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 GOLGA6L1Q8N7Z2 621 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 FBXO36Q8NEA4 188 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 FATE1Q969F0 183 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 EIF2B3Q9NR50 452 aaKnown RBP14.98□□□□□ -0.01
CBX3-201ENST00000337620 CDH22Q9UJ99 828 aa14.98□□□□□ -0.01
CBX3-201ENST00000337620 SZT2Q5T011 3432 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 E7ESA3 106 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 CBX4O00257 560 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 CYBBP04839 570 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 GLDCP23378 1020 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 FSHRP23945 695 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 MMP13P45452 471 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 LBRQ14739 615 aaKnown RBP14.97□□□□□ -0.01
CBX3-201ENST00000337620 LRIG3Q6UXM1 1119 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 ZNF534Q76KX8 674 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 MFN1Q8IWA4 741 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 CCDC117Q8IWD4 279 aaPredicted RBP14.97□□□□□ -0.01
CBX3-201ENST00000337620 EFHBQ8N7U6 833 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 SPATA22Q8NHS9 363 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 TTC25Q96NG3 672 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 MLPHQ9BV36 600 aaPredicted RBP14.97□□□□□ -0.01
CBX3-201ENST00000337620 PHACTR1Q9C0D0 580 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 PIH1D1Q9NWS0 290 aaKnown RBP14.97□□□□□ -0.01
CBX3-201ENST00000337620 CHMP2BQ9UQN3 213 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 C5orf42Q9H799 3197 aa14.97□□□□□ -0.01
CBX3-201ENST00000337620 KDELR3O43731 214 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 PAPLNO95428 1278 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 AP2A1O95782 977 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 NUDT17P0C025 328 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 HOXD9P28356 352 aaPredicted RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 MZF1P28698 734 aaPredicted RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 ELK3P41970 407 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 MAXP61244 160 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 OLIG2Q13516 323 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 ZNF77Q15935 545 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 GPR149Q86SP6 731 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 WFDC5Q8TCV5 224 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 OXNAD1Q96HP4 312 aaPredicted RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 FCRL5Q96RD9 977 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 LINC00597Q9H2U6 94 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 VPS37BQ9H9H4 285 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 LRRC4CQ9HCJ2 640 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 XAB2Q9HCS7 855 aaKnown RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 FAM53CQ9NYF3 392 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 ACTL7AQ9Y615 435 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 GOLGA6CA6NDK9 693 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 OPA1O60313 960 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 USP12O75317 370 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 SYF2O95926 243 aaKnown RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 MT-CYBP00156 380 aaPredicted RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 GOLGA6DP0CG33 693 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 ZNF844Q08AG5 666 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 DNAJC21Q5F1R6 531 aaKnown RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 MPP7Q5T2T1 576 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 TMCO4Q5TGY1 634 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 ANKRD54Q6NXT1 300 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 TMEM184AQ6ZMB5 413 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 GET4Q7L5D6 327 aaPredicted RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 IGDCC3Q8IVU1 814 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 PALM2Q8IXS6 379 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 TEX26Q8N6G2 289 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 PDFQ9HBH1 243 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 GOLGA6AQ9NYA3 693 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 VPS28Q9UK41 221 aa14.96□□□□□ -0.01
CBX3-201ENST00000337620 AAR2Q9Y312 384 aaKnown RBP14.96□□□□□ -0.01
CBX3-201ENST00000337620 C2orf16Q68DN1 1984 aa14.96□□□□□ -0.02
CBX3-201ENST00000337620 H3BQF6 201 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 CACNG3O60359 315 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 CSKP41240 450 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 EIF3BP55884 814 aaKnown RBP14.95□□□□□ -0.02
CBX3-201ENST00000337620 SESN2P58004 480 aaPredicted RBP14.95□□□□□ -0.02
CBX3-201ENST00000337620 USP4Q13107 963 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 ZNF235Q14590 738 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 LRRC8BQ6P9F7 803 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 SYCE2Q6PIF2 218 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 ZNF783Q6ZMS7 281 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 TMEM25Q86YD3 366 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 NPAS3Q8IXF0 933 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms