RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 MAGEE2Q8TD90 523 aaPredicted RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 STN1Q9H668 368 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 KPNA6O60684 536 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 DDNO94850 711 aaPredicted RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 KRT20P35900 424 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 RIPK1Q13546 671 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 GSTA3Q16772 222 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ARHGAP15Q53QZ3 475 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 IL27RAQ6UWB1 636 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 MARK2Q7KZI7 788 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 TLK2Q86UE8 772 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■■ 116
RTN4-202ENST00000337526 SETD9Q8NE22 299 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 RP9Q8TA86 221 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 KCTD4Q8WVF5 259 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 RSPH1Q8WYR4 309 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ABCC13Q9NSE7 274 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 LNPEPQ9UIQ6 1025 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 PADI4Q9UM07 663 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 EFR3BQ9Y2G0 817 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 TPRKBQ9Y3C4 175 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 NR2E1Q9Y466 385 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 SPATA31C2B4DYI2 1134 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 PEX11AO75192 247 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 CCNB1P14635 433 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 TFEBP19484 476 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 RPL5P46777 297 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 GSSP48637 474 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ADARP55265 1226 aaKnown RBP13.94□□□□□ -0.18
RTN4-202ENST00000337526 C21orf59P57076 290 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 SLC1A5Q15758 541 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 DDR2Q16832 855 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ARMCX4Q5H9R4 360 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 FAM171A1Q5VUB5 890 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 TTC27Q6P3X3 843 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 FAM228AQ86W67 206 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ECHDC2Q86YB7 292 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 RIOX2Q8IUF8 465 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 LGI2Q8N0V4 545 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 OR8H2Q8N162 312 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 HELQQ8TDG4 1101 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 MIEF1Q9NQG6 463 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ARL8BQ9NVJ2 186 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 SATB2Q9UPW6 733 aa13.94□□□□□ -0.18
RTN4-202ENST00000337526 ATXN2Q99700 1313 aaKnown RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 B4GALT5O43286 388 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 FAM20BO75063 409 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 LYPLA1O75608 230 aaPredicted RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 PBLDP30039 288 aaPredicted RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 C1DQ13901 141 aaKnown RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 TAF5Q15542 800 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 LACTB2Q53H82 288 aaPredicted RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 PTGR2Q8N8N7 351 aaPredicted RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 OSBPL7Q9BZF2 842 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 MYOM1P52179 1685 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 UMODL1Q5DID0 1318 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 GSC2O15499 205 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 S100A3P33764 101 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■□□□□ 8.9
RTN4-202ENST00000337526 BNIP1Q12981 228 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 USP4Q13107 963 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 PACS1Q6VY07 963 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 CMC1Q7Z7K0 106 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 C10orf107Q8IVU9 208 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 TSPAN14Q8NG11 270 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 APOL4Q9BPW4 351 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 NMUR2Q9GZQ4 415 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 SNX15Q9NRS6 342 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 UBA2Q9UBT2 640 aaPredicted RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 SLC25A13Q9UJS0 675 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 ATP6AP2A0A1C7CYW4 349 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 FGF10O15520 208 aaPredicted RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 ATP6AP2O75787 350 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 STAU1O95793 577 aaKnown RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 EPHX2P34913 555 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 BOP1Q14137 746 aaKnown RBP13.93□□□□□ -0.18
RTN4-202ENST00000337526 STARD3Q14849 445 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 KCTD21Q4G0X4 260 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 ARHGAP17Q68EM7 881 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 HEATR4Q86WZ0 1026 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 HERC6Q8IVU3 1022 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 SVOPQ8N4V2 548 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 GSTCDQ8NEC7 633 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 ACTRT2Q8TDY3 377 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 RCN3Q96D15 328 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 CIPCQ9C0C6 399 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 SLC7A5P2Q9GIP4 190 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 XPR1Q9UBH6 696 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 FBXO5Q9UKT4 447 aa13.93□□□□□ -0.18
RTN4-202ENST00000337526 DNM1LO00429 736 aa13.92□□□□□ -0.18
RTN4-202ENST00000337526 TRIM24O15164 1050 aa13.92□□□□□ -0.18
RTN4-202ENST00000337526 TTKP33981 857 aa13.92□□□□□ -0.18
RTN4-202ENST00000337526 BFSP2Q13515 415 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms